Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01552 ATGGAACCGCCATTGCAACAGCAACCGCAGGCGCCGCCGCCACCGCCGCGCTCCCTCACCATCCTCGGGAAATACCAGCTGACGCGCCTCCTCGGCCGTGGCAGCTTCGCCAAGGTCTACCAGGCACGATCCCTCATCGACGGCGCCAACTTCGCCGTCAAAATCATTGACAAATCCAAAACCGTCGACGCCGGCATGGAGCCCCGTATAATCCGCGAGATCGACGCCATGCGCCGCCTCCACCACCACCCTAACATCCTTAAAATCCACGAGGTCATGGCCACGAAGACCAAGATCCACCTCATCGTTGAGCTCGCCGACGGCGGCGAGCTCTTCGCCAGAATCTCCCGTCGCGGCCGTTTGCCGGAGTCCACGGCGCGCCGGTACTTCCAGCAGCTGGTCTCCGCGCTAAGGTTCTGCCACCGCAACGGCGTGGCGCACCGCGACCTAAAGCCGCAGAACCTCCTCCTCGACGCCGAAGGAAACCTCAAGGTATCCGACTTCGGCCTCTCCGCTCTGCCGGAGCATCTCAAGAACGGCCTTCTCCACACAGCATGCGGTACGCCGGCGTACACAGCACCGGAGATCCTCCGCCAGAACGGCGGGTACGACGGGTCCAAGGCCGACGCCTGGTCTTGCGGCCTCATTCTTTACGTCTTCCTCGCTGGCTACCTTCCGTTCGATGACACGAACATGCCCGCGATGTGCAAGAGGATTTCCCGGCGAGATTACCAGTTCCCTGACTGGATAACAAAACCGGCACGTTATGTTATATATAAATTACTGGACCCGAACCCGGAAACCAGAATGGGCTTAGAGGCTCTGTTTACGAACTCGTGGTTCAAGAAATCATTGAAACCAGAAACGGCGGAGGAAAGCGCGTTTGGGTGGGATAACGTTTATGTGAAGGGTTGTTACTACGAAGGGGCCAAGTGTTCGGGTGTGAACGCGTTTGATATAATATCGATGTCTTCGGGTTTGAATTTAACGAGGTTGTTCGAAACGACATCGGATGCGGGTAGTAGACGGGAGAAGAGATTCACTTCGAGTGCGCGCGTGGAGGTGGTGGAGGAGAAGGTTAAGGAAGTCGGTGGGGTTTTGGGGTTTAAGGTTGAGGTTGGGAAAACCGTTAACGGTGCAATTGCGTTGTTGAAAGGTAAGATGGCTTTGGTATTTGAGGTGCTGCAGATTGTGCCCGATCAGCTTCTTTTGGTGGCTGTGAAGGTCGTGGAGGGTGGGTTAGAGTTTGAGGAGCACCATTGGGGTGATTGGAAAAATGCCTTGCAAGATCTCGTCCTTTCTTGGCACAACGATGATTCCTGA 1323 0.5624 MEPPLQQQPQAPPPPPRSLTILGKYQLTRLLGRGSFAKVYQARSLIDGANFAVKIIDKSKTVDAGMEPRIIREIDAMRRLHHHPNILKIHEVMATKTKIHLIVELADGGELFARISRRGRLPESTARRYFQQLVSALRFCHRNGVAHRDLKPQNLLLDAEGNLKVSDFGLSALPEHLKNGLLHTACGTPAYTAPEILRQNGGYDGSKADAWSCGLILYVFLAGYLPFDDTNMPAMCKRISRRDYQFPDWITKPARYVIYKLLDPNPETRMGLEALFTNSWFKKSLKPETAEESAFGWDNVYVKGCYYEGAKCSGVNAFDIISMSSGLNLTRLFETTSDAGSRREKRFTSSARVEVVEEKVKEVGGVLGFKVEVGKTVNGAIALLKGKMALVFEVLQIVPDQLLLVAVKVVEGGLEFEEHHWGDWKNALQDLVLSWHNDDS* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01552 440 SMART serkin_6 25 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01552 440 FunFam Non-specific serine/threonine protein kinase 16 303 - -
Lapu7g01552 440 Pfam Protein kinase domain 25 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01552 440 Pfam NAF domain 315 372 IPR004041 GO:0007165
Lapu7g01552 440 Gene3D Transferase(Phosphotransferase) domain 1 17 309 - -
Lapu7g01552 440 ProSiteProfiles Protein kinase domain profile. 25 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01552 440 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
Lapu7g01552 440 CDD CIPK_C 316 429 - -
Lapu7g01552 440 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Lapu7g01552 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Lapu7g01552 440 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 20 380 - -
Lapu7g01552 440 SUPERFAMILY Protein kinase-like (PK-like) 21 287 IPR011009 -
Lapu7g01552 440 Gene3D Kinase associated domain 1, KA1 312 433 - -
Lapu7g01552 440 FunFam Non-specific serine/threonine protein kinase 18 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01552 Lapu-Chr7 30970563 30972278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01552 1 438 Miscellaneous Gene Families AT3G23000 55.204 9.82e-167 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lapu7g01552 Pkinase 2.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01552 K12761 - gmx:100784173 716.072