Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01523 ATGGGTTCAATTGGTAACCAAGAAGCCGTTGAGCTTTTCGAAGGCCAAAATATTTTGTACATGCAGATATTTGGCCACCTTAAACCTTTGTGCCTTAAGTGGGCTCTCCAACTAGGTATTCCAGACATAATACACAACCATGGAAAACCTATTACTCTTTCTCAGTTGGTCTCAACTCTTCAAGTTCCACCATCTAAGACTTCTTTTGTGCAGCGATTAATGCGCTTTTTGGCACACAATGAAATCTTTGATATCCACCACAGTCTAGAAGATCATGAAGTAGCATATGCTCTAACCCCAGCATCAAAACTTCTAGTCACTGGCTGTGGCCATTGTTTATCTCCAATGGTTCGGTTGATCACTGATCCACTTCTCATGAGTAAATACCACCACTTGGGAGAATGGATTTGTGGGGAGGACCCCACACTGTATGAAACAGCCTTAGGGACAAGTGTTTGGGGACTTCTTGACAGAGAACCTAAATACTTGAGTCTCTTCAGTGAGGGCATGGCAAGTGATTCCCAAATGGTGGACTTGGCTCTCAAAAGTTGCACTTCAGTTTTTGAGAGTTTAGATTCCATCGTGGATGTAGGTGGCGGAACTGGAACCACAGCCAGAATTATCAGCGAGGCATATCCTAAGCTGAAATGTGTTGTGCTTGACCTTCCTCAGGTTATAGCAAACTTGACAGGAACTGATAATTTAAGCTTTGTTGGTGGTGACATGTTCAAATCTATCCCTCAAGCTGATGCAATCCTACTAAAGTGGGTTTTACATGATTGGGATGACGAAAGCTGCGTAAAGATTCTGAAAAACTGCAGAGAAAGTATCTCAAGGAAAGGCAATAGAGGGAAAGTGATTGTGATAGAAACAGTGATAAATGAAAAGTTTGATTACAAAGATGTGACCCAAACAAAGCTGAGTTTGGATATGACAATGTTGGCCATTAATGGAAAGGAGCGAACTGAAGAAGAATGGAAAAACCTGTTCATTGAAGCAGGATTCAAAGACTACAAATTGTTTCCCATTCTTGGTTTTAGATCGCTTATTGAGGTCTATCCATAG 1065 0.4141 MGSIGNQEAVELFEGQNILYMQIFGHLKPLCLKWALQLGIPDIIHNHGKPITLSQLVSTLQVPPSKTSFVQRLMRFLAHNEIFDIHHSLEDHEVAYALTPASKLLVTGCGHCLSPMVRLITDPLLMSKYHHLGEWICGEDPTLYETALGTSVWGLLDREPKYLSLFSEGMASDSQMVDLALKSCTSVFESLDSIVDVGGGTGTTARIISEAYPKLKCVVLDLPQVIANLTGTDNLSFVGGDMFKSIPQADAILLKWVLHDWDDESCVKILKNCRESISRKGNRGKVIVIETVINEKFDYKDVTQTKLSLDMTMLAINGKERTEEEWKNLFIEAGFKDYKLFPILGFRSLIEVYP* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01523 354 Pfam O-methyltransferase domain 129 336 IPR001077 GO:0008171
Lapu7g01523 354 PANTHER O-METHYLTRANSFERASE 29 339 IPR016461 GO:0008168
Lapu7g01523 354 Gene3D Vaccinia Virus protein VP39 108 354 IPR029063 -
Lapu7g01523 354 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Lapu7g01523 354 FunFam O-methyltransferase ZRP4 108 354 - -
Lapu7g01523 354 SUPERFAMILY "Winged helix" DNA-binding domain 11 108 IPR036390 -
Lapu7g01523 354 CDD AdoMet_MTases 194 293 - -
Lapu7g01523 354 FunFam Coniferyl alcohol 9-O-methyltransferase 3 105 - -
Lapu7g01523 354 Gene3D - 2 105 IPR036388 -
Lapu7g01523 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 353 IPR029063 -
Lapu7g01523 354 PIRSF O-mtase 2 354 IPR016461 GO:0008168
Lapu7g01523 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 354 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01523 Lapu-Chr7 30683986 30685181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01523 29 340 Monolignol Biosynthesis Gene Families AT5G54160 35.312 2.65e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01523 K22588 K13262 gmx:100819853 557.755