Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01519 ATGGAGTCAAGCAATGTACATGCTGATAAAAGGGCAGATAAAAGGATAATAAGATACACGGAATGTCTGAAGAACCATGCAGCTTCAATTGGTGGCAATGCTACTGATGGGTGTGGCGAGTTCATTGCTGATGGAGAAGAAGGCACCCTTGAGGCTCTCAAATGCTCAGCTTGCAATTGCCACAGAAACTTCCACAGAAAAGAGATAGAGTCTTCTGATTCCTATTCCACTCCTCTGATGATTATACCTGACACTACTCAGATGGGGCCCATTTTAGCTCATTTATCTCCCATCAAAAGTGGTTCAATTAGTCCTTCTGATGTGTCTGATGAGAAGGACTGTGAAGATGGGATGACTAAGGAGGTGGGAAATCCAACTGAAAAGATGAAGAAGAGGTTTAGAACCAAGTTCACACAAGAACAAAAGGAGAAGATGTTGCTTTTTGCAGAAAGGGCAGGGTGGAGGATACAAAAGCTAGATGAATCTGTGGTGCAAAAGTTTTGCCAAGAGATTGGAATCAAAAGAAGAGTCCTCAAAGTGTGGATTCACAATAACAAGAACACTTTTGCCAAGAGAAATCCCTCCACTAGCTAG 594 0.4242 MESSNVHADKRADKRIIRYTECLKNHAASIGGNATDGCGEFIADGEEGTLEALKCSACNCHRNFHRKEIESSDSYSTPLMIIPDTTQMGPILAHLSPIKSGSISPSDVSDEKDCEDGMTKEVGNPTEKMKKRFRTKFTQEQKEKMLLFAERAGWRIQKLDESVVQKFCQEIGIKRRVLKVWIHNNKNTFAKRNPSTS* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01519 197 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 19 68 IPR006456 -
Lapu7g01519 197 MobiDBLite consensus disorder prediction 106 123 - -
Lapu7g01519 197 SUPERFAMILY Homeodomain-like 124 191 IPR009057 -
Lapu7g01519 197 NCBIfam homeobox domain, ZF-HD class 130 187 IPR006455 -
Lapu7g01519 197 Gene3D - 116 191 - -
Lapu7g01519 197 MobiDBLite consensus disorder prediction 102 123 - -
Lapu7g01519 197 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 10 188 - -
Lapu7g01519 197 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 18 69 IPR006456 -
Lapu7g01519 197 Pfam ZF-HD protein dimerisation region 17 69 IPR006456 -
Lapu7g01519 197 FunFam Zinc-finger homeodomain protein 2 117 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01519 Lapu-Chr7 30659476 30660069 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01519 14 193 ZF-HD Transcription Factor Family AT1G14440 51.759 1.18e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lapu7g01519 ZF-HD_dimer 3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01519 - - gmx:100793926 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01519 7 30659476 30660069 Lapu7g01519 7 30659476 30660069 ECH