Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01518 ATGACTTCCAGGCGTTTGAGGGCATTCAAGCGGTGGATGCAGTCCAAGGGGTTCCAGTGGAGCGATGCACTGGAGTTTTTGGATACACCAGAAGAGGGAATATCAGTGAGAGCTTTGTGCCAGTTGACGGAAGGTGATGTTGTGGCCAAAATGCCAAAGGAAGCTTGCCTCACCACCAAGACTAGTGGGGCACGTGAGATCATTGAAGAGGCTGATTTGGATGGTCATTTGGGGCTAGCATTTGCCATCATGTATGAGAGAAGCTTGGGTGGGGAATCACCTTGGTATGGATACCTTCAACTCTTGCCTCACCAAGAGTGCGTGCCAATTGTTTGGACCCTCAATGAAGTAAACGAGCTTTTGTGTGGTACTGAGCTTCACCAGACAGTGCAAGAAGACAAGGCTCTGATTTACGAAGACTGGAAAGAGAATATTCTTCCCCTATTGGATTTAGCACCTTTGAAACTAAACCCGGAATTCTTTGACATAGAACAATACTTTGCAGCGAAAAGTCTTATATCTTCACGATCCTTTGAGATTGATGATTACCATGGTTTTGGCATGGTTCCCTTTGCAGATCTATTCAATCATAAAACAGGAGCAGAGGATGTGCATTTCACTGCTATGTCTTCTAATTATGAATCAGGTAGCGATGTTGATGGTAGTAATAATGACAAGGGCATTGTTAAGGAAGAAGTAACACTGAATCAAAATTCCTCTATGGATATGACTGCGTCAATTGCTGCTGATGTTGGGAACTGCATTGCTAGTGATTTGGAGAGTTCTTCAGTTAGTGAGGATGATACTTCTGTGTTGGAGATGATTATGATAAAAGATGTCAGCAGTGGAACTGAGGTATTTAATACTTATGGGCTATTGGGTAATGCTGCTTTGCTTCACAGATATGGATTTACCGAGCAAGATAATTCCTATGATATTGTAAACATAGATATGGAGCTGGTACTTCAATGGTGTTCTTCAGCGTTTTCTGACCGCCACAGTAGAGCAAGAGTTTCCCTTTGGAGAAGGTTAGGCTATTCTGCATGTGGCAGCCAAGACTCTGAATATTTTGAGATCTCATTTGATGGAGAACCACAAATTGAACTCCTCATTTTATTACACATCATGTCATTGCCTGATAATGCTTACCAAAATTTGGATCTATCGGTGGCAGTTGCTGGGAATTGTTATGAATCAAATGGTGGAAACACCCATCTGAATGGTAATATCGATCCTAATGAAGCATTTAATATGATTAAAAAGTCCGTGCTGCCTAAAAAGGTTTGTGATGCCCTGTTGTCACTTGCTGACACGAGGGAGAGTCTCTATGGTTTGAATTCAATTGAATATGATATTGAAGCATTGGAAAAATGTAGTTTAGTTGGAGAGAGAAAGCTGTATCATTCTTTGGTGCTGCGCATCAATGAAAGGAAGATTCTTCAAAAGCTCAGAAATTATGCTTCACGGTCATTTCAAATCAATAAGCATAGTTCTCCAAGGAAGAAATTGAAAAGGACAACAAAGAAAACGAGTTGA 1536 0.4121 MTSRRLRAFKRWMQSKGFQWSDALEFLDTPEEGISVRALCQLTEGDVVAKMPKEACLTTKTSGAREIIEEADLDGHLGLAFAIMYERSLGGESPWYGYLQLLPHQECVPIVWTLNEVNELLCGTELHQTVQEDKALIYEDWKENILPLLDLAPLKLNPEFFDIEQYFAAKSLISSRSFEIDDYHGFGMVPFADLFNHKTGAEDVHFTAMSSNYESGSDVDGSNNDKGIVKEEVTLNQNSSMDMTASIAADVGNCIASDLESSSVSEDDTSVLEMIMIKDVSSGTEVFNTYGLLGNAALLHRYGFTEQDNSYDIVNIDMELVLQWCSSAFSDRHSRARVSLWRRLGYSACGSQDSEYFEISFDGEPQIELLILLHIMSLPDNAYQNLDLSVAVAGNCYESNGGNTHLNGNIDPNEAFNMIKKSVLPKKVCDALLSLADTRESLYGLNSIEYDIEALEKCSLVGERKLYHSLVLRINERKILQKLRNYASRSFQINKHSSPRKKLKRTTKKTS* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01518 511 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 5 440 - -
Lapu7g01518 511 Gene3D set domain protein methyltransferase, domain 1 2 304 - -
Lapu7g01518 511 SUPERFAMILY SET domain 268 310 IPR046341 -
Lapu7g01518 511 Pfam SET domain 33 291 IPR001214 GO:0005515
Lapu7g01518 511 CDD SET_LSMT 23 305 - -
Lapu7g01518 511 SUPERFAMILY SET domain 3 206 IPR046341 -
Lapu7g01518 511 Gene3D - 307 487 IPR036464 -
Lapu7g01518 511 ProSiteProfiles SET domain profile. 22 291 IPR001214 GO:0005515
Lapu7g01518 511 PIRSF RMS1_SET 1 496 IPR011383 GO:0016279|GO:0018026
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01518 2 508 NAC Transcription Factor Family AT3G56570 53.235 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lapu7g01518 SET 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01518 - K05302 vra:106769924 892.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01518 7 30653413 30657921 Lapu7g01518 7 30653413 30657921 ECH