Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01505 ATGGCTGAATTTATCTCCACTTGCATCTTTGTCTTTGTGGGAGAAGGTCAAATTTACAAGGAACCGGGATCATCCGCAGGTGAGCTAGTGGTAATTGCCGTGGCTCATGCTTTTGCTCTATTTGCTGCTATTTCTGCTAGTGCTCATGTTTCTGGTGGACACTTGAACCCTGCTGTCACTTTTGGCGCTCTTCTGGGTGGAAGGATCTCCGTCCTTAAAGCACTTTACTATTGGATTGCTCAAATCCTTGGTTCTATTGTTGCTGCTCTCTTGTTGAGGCTTGTCACTAACAACATGAGACCAGAGGGGTTGAGTGTATCAACAGGAGTTGGAGCAGTTCACGGTCTTATACTTGAAATTGGCCTCACATTTGGTCTGATGTACACTGTCTATGCCACTGCTATTGATCCTAAACGGGGCACAGTAAGCACAATTGCACCCTTAGCCATTGCACTTGTTGTAGGGGCAAACATCCTGGCTGGTGGGCCCTTTGATGGAGCATGCATGAACCCTGCTCGGGCTTTTGGGCCTGCATTGGTGGGCTGGAGGTGGCAGTACCACTGGATCTTCTGGGTTGGTCCATTAATTGGAGCAGCCCTAGCAGCAGTTCTGTATGAATTCGTTTTAGTCCCAATTGAGCCTCCTGAACACCAACCTTTGCCTGCTGAAGATTACTAG 678 0.4808 MAEFISTCIFVFVGEGQIYKEPGSSAGELVVIAVAHAFALFAAISASAHVSGGHLNPAVTFGALLGGRISVLKALYYWIAQILGSIVAALLLRLVTNNMRPEGLSVSTGVGAVHGLILEIGLTFGLMYTVYATAIDPKRGTVSTIAPLAIALVVGANILAGGPFDGACMNPARAFGPALVGWRWQYHWIFWVGPLIGAALAAVLYEFVLVPIEPPEHQPLPAEDY* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01505 225 CDD MIP 2 208 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu7g01505 225 Gene3D Glycerol uptake facilitator protein. 1 214 IPR023271 -
Lapu7g01505 225 FunFam Probable aquaporin TIP1-1 1 224 - -
Lapu7g01505 225 SUPERFAMILY Aquaporin-like 1 215 IPR023271 -
Lapu7g01505 225 ProSitePatterns MIP family signature. 54 62 IPR022357 -
Lapu7g01505 225 NCBIfam MIP family channel protein 2 205 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu7g01505 225 PRINTS Major intrinsic protein family signature 151 173 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu7g01505 225 PRINTS Major intrinsic protein family signature 36 60 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu7g01505 225 PRINTS Major intrinsic protein family signature 118 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu7g01505 225 PRINTS Major intrinsic protein family signature 73 92 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu7g01505 225 PRINTS Major intrinsic protein family signature 188 208 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu7g01505 225 PANTHER AQUAPORIN-8 1 211 IPR034294 -
Lapu7g01505 225 Pfam Major intrinsic protein 1 205 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01505 Lapu-Chr7 30475036 30476207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01505 1 225 Major Intrinsic Protein MIP AT1G73190 63.223 1.86e-97 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01505 K09873 - gmx:100797632 382.104