Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01489 ATGAAAGGGGGGCGATCGCACCGCCCTCAGAGCTCTGACCCGCCGGACGAGTGGGTGGACGGGTCGTGGACGGTGGATTGCATCTGCGGCGTGACCTTCGACGATGGGGAGGAGATGGTGAAGTGCGATGAGTGCGGCGTGTGGGTTCACACGCGCTGCTCGCGATATGTGAAGGGCGACGACACCTTTGCCTGCGACAAGTGCAAGGCCAGGCACAACAACAACCCGGAGGAGACCGAGGTGGCGCAGTTCCTTGTGGAACTCCCCACGAAAACCATCTCCATGGACAACAAAATGGCCCTCCCCTCTCGGCCCAGGCTCTGGACCGATAAGCCAATCCAGGACCGGGTCCACGTCCAGGGCCCACCCGGAGGCGACCCTTCCATCTTTTCCGCCACCTCCGTCTCTTCGATTTTCTCCCCCCACCTCTGGAAGGCCTGCGGGTACGTTCCCAAGAAGTTTAATTTTCAGTACAAGGAGTTCCCCTTCTGGAGCGATAACGATGATGACAAGGATAATGTTAACGTTAATGAGAGTTTAATAGCACAACCACAAGAACAACCACAGGCACAAGATAATAACGAGAATGGGGCTGGGGCTCTCGTATATTTGTCTAAAGACGGTGATAATAATGGTTCTGCTCCTGTCTTGGACTCTTCCTTTATTGATGCGAGATCTGGCCACGCCAAGGAAACCGAAACGGAAACGGGCAACTTTGGGAGAGAGGATGTGCCGCCGCGTGTCCACAGTGAGGTGAAGAAGGAGAGGACACTGCTGAGACCTCCTGTTGTTCATAACAGTAAGCGCAGCAAAGGGGATTTCGGGTCTTCGAATTCAAAAGACCGGAGCGGGAAGAAGCGCGTTAGGACTACCTCTGACAGAGAGGTGGATCCCAGGAGGAGAACTCTGCATTCTTCTAAATCAGTATTTACACCCGCTGGTGATGCAAAACAAGTGGACTTTTATGAGGACAGAGGACCAAAGATTTTCAAGACTGACACTCGGAGCATAAAGAATAAAAACTTAAAAGAGATAGTTGTTCAAGAATGTGTTTCTGATGATTATTTAGCTGTTGATACCATCATGGAGGAGCCAAATACTAACTTAACAACTACGGAGGACTCTTCGGAACCATTGTATCCTGACACGAATAGACACGGTGTTTCTGTTGTAGATGTACTAGCAGAAGAGAAGCCTAATCATAAACCTCCTACTGTGGTAGAGATGTCTTCTAAGACTGATGATGCCGTTACGTCGGCTTTAAAGCAGAATAATGTTCGAAATTCTTCAGCTAAAGAAAAGGATGGAGATTGCTCAGTAGCTGATAATTCAGATGATACTTTAGTAGTAAGAAGTGCTGCAAGTCCTCACCCAGAAGGTCATTGTGGTTCTGCACAAGAACTTGTGGATAACCAAGTTTCTCAAGATCTTGACCGGAACATGCGTTCAAGCTCTACAAAGTGCAAAAGTAAGATGAAAAGAGAAGACGATGTTGATAATTTTAAGAAACCCTCAATTTTTCATCCTTCTCCTATCAGTGATCTTAAAAACAATGAAAAACTATCTGATCACAAATCTGATGTTGTTAAAGTGAATGATGCGCCAGTTCCTAGTTTACCATCATGTGAAAATAGGGTCGGCGGTGTTGACATTTCATCAGAAGTAATCCCTACTGATCATATCAATAAACCCAATGAATTATCTGGTGATTTTTGTCATAGAAAACAAGAACTGGAGGGTTCTGAAGGTTCCTTTGATACACAAAAGGGATTTTCAGAAACAAAAGATGGTTCAGACTCTCGTAAAGATCCATCAAAATCTGAAGCACTGGGATGTCCACCCAAAGTGCTAGCATGTGTTGGAAAGACATCTCCAACTTCGTCAACCATGAACTCCAAATCATTGGGTCATGACATCAAATCTGAAGATACTGAAACTGTTAATCCTTTTACGAAGCATGGAGTGATGGCTGATTGTAATGTTCACATAAAGAATGAAAATTGTACAAGTAATGTTGCCAAGGATGAAAATCCAAAGAAGTCTGTAAGAGAGCGACCAAAATCCTCCTTAAATTCCAATTCAAAGGGATTGCATTCAAGCAGGAGTGTGCATAATTCTGTCTCCAAGCAAGCAAATTCAGATGCGAGAGATTCTGTTCCTGTATCTTCTAAATCTTTGATACATCAGACTGCGAGTATATTAGGCTCTAGTGAGTCTAATGCACCTCTGCACAATCAGAAGGTTCTACAAGTGCAGAATAAGATTTCGTCTTCAGCACCACAGAAAGTAGAAAAAATTAACCAAACAAACATCACCACTTCCTCTAAGTTGAACCAAGGTCATGTGCAGTCAGTGAATCCTTCTCCGATATCAAATTCTTCAATGTTGAGTGATGAAGAGCTAGCTCTGCTATTGCACCAAGAACTGAATAGCTCACCTCGTGTACCTCGGGTACCCCGAGCACGCCATGCAGGAAGCTTGCCCCAGCTGACTTCTGCTAGTGCTACAAGCATGCTAATGAAGCGAACGTCGGGTGGAGGAAAGGATCATTATTTGGTATCTAGACGAAAACACAAGGAGGCATCCAGAGATGGGTCTGGCAGTTCTCGTGAACTGGAAGATGAGGCTAAAAGGATAGAGAAGGAGAAGGGTCCATCCTCTTCTGATCAGAGGAAACAAGATATGTCATATATGGAAGATGCTACTGTGAGGGAAGAAGGCCTTGCATCTATGACAGCAGCAAACTCCATCACAAACAACACTGTTTCTTCCACTCCTGCAATTGCAAACAATGATCCATCCTCTCCTCCTGAGGATCAGAATTTATCATCTATGCGTAACTCACCTAGGAATATCTCTGATGATGATACAGCGACTGCTGGAAGGCCAGTTCATCGCACCTTACCTGGTTTAATCAATGATATTATTATAATGAGCAAAGGCAGGCGAATGACATATGAGGAACTCTGTAATGCTGTGCTACCGCACTGGCATAACTTGAGGAAACATAATGGAGAGCGTTATGCCTACTCAAGTCACTCCCAGGCTGTTCTTGATTGTTTGAGGAACCGGCAAGAATGGGCAAGGTTGGTTGATCGTGGTCCAAAGACAAATTCTAATAGAAAAAGGCGTAAGCTGGAGGCTGAAGAATCTGATGATAATGGATATGGCAAGGGAAGATCTGCAAAAGAGGCTGAAGGGAAGAACTTTGAGTTGCAAAAGGAAGAGTTCCCCAAAGGCAAGCGTAAAGCTCGAAAACGCAGACGCCTTGCCCTTCAGGGAAGAGCAGTGAAGGATGTCAGGAGGAGACAAAAAACTGACTCGCTAACGGATGAGGATGTTGGTCCATTCTCCAATTCTAGTGAAGAGAGCATGTTCAGTGAAGATGAAATTCAGGTTGGCAGAATATGCCCAGCCGGAAGTACATCAGACGAGGCAGGTAGTGCCTAA 3450 0.4539 MKGGRSHRPQSSDPPDEWVDGSWTVDCICGVTFDDGEEMVKCDECGVWVHTRCSRYVKGDDTFACDKCKARHNNNPEETEVAQFLVELPTKTISMDNKMALPSRPRLWTDKPIQDRVHVQGPPGGDPSIFSATSVSSIFSPHLWKACGYVPKKFNFQYKEFPFWSDNDDDKDNVNVNESLIAQPQEQPQAQDNNENGAGALVYLSKDGDNNGSAPVLDSSFIDARSGHAKETETETGNFGREDVPPRVHSEVKKERTLLRPPVVHNSKRSKGDFGSSNSKDRSGKKRVRTTSDREVDPRRRTLHSSKSVFTPAGDAKQVDFYEDRGPKIFKTDTRSIKNKNLKEIVVQECVSDDYLAVDTIMEEPNTNLTTTEDSSEPLYPDTNRHGVSVVDVLAEEKPNHKPPTVVEMSSKTDDAVTSALKQNNVRNSSAKEKDGDCSVADNSDDTLVVRSAASPHPEGHCGSAQELVDNQVSQDLDRNMRSSSTKCKSKMKREDDVDNFKKPSIFHPSPISDLKNNEKLSDHKSDVVKVNDAPVPSLPSCENRVGGVDISSEVIPTDHINKPNELSGDFCHRKQELEGSEGSFDTQKGFSETKDGSDSRKDPSKSEALGCPPKVLACVGKTSPTSSTMNSKSLGHDIKSEDTETVNPFTKHGVMADCNVHIKNENCTSNVAKDENPKKSVRERPKSSLNSNSKGLHSSRSVHNSVSKQANSDARDSVPVSSKSLIHQTASILGSSESNAPLHNQKVLQVQNKISSSAPQKVEKINQTNITTSSKLNQGHVQSVNPSPISNSSMLSDEELALLLHQELNSSPRVPRVPRARHAGSLPQLTSASATSMLMKRTSGGGKDHYLVSRRKHKEASRDGSGSSRELEDEAKRIEKEKGPSSSDQRKQDMSYMEDATVREEGLASMTAANSITNNTVSSTPAIANNDPSSPPEDQNLSSMRNSPRNISDDDTATAGRPVHRTLPGLINDIIIMSKGRRMTYEELCNAVLPHWHNLRKHNGERYAYSSHSQAVLDCLRNRQEWARLVDRGPKTNSNRKRRKLEAEESDDNGYGKGRSAKEAEGKNFELQKEEFPKGKRKARKRRRLALQGRAVKDVRRRQKTDSLTDEDVGPFSNSSEESMFSEDEIQVGRICPAGSTSDEAGSA* 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01489 1149 ProSitePatterns Zinc finger PHD-type signature. 27 68 IPR019786 -
Lapu7g01489 1149 MobiDBLite consensus disorder prediction 848 900 - -
Lapu7g01489 1149 MobiDBLite consensus disorder prediction 1031 1079 - -
Lapu7g01489 1149 MobiDBLite consensus disorder prediction 579 642 - -
Lapu7g01489 1149 MobiDBLite consensus disorder prediction 1093 1110 - -
Lapu7g01489 1149 MobiDBLite consensus disorder prediction 813 900 - -
Lapu7g01489 1149 MobiDBLite consensus disorder prediction 921 965 - -
Lapu7g01489 1149 MobiDBLite consensus disorder prediction 482 503 - -
Lapu7g01489 1149 MobiDBLite consensus disorder prediction 921 955 - -
Lapu7g01489 1149 MobiDBLite consensus disorder prediction 274 304 - -
Lapu7g01489 1149 MobiDBLite consensus disorder prediction 1031 1149 - -
Lapu7g01489 1149 PANTHER UNCHARACTERIZED 1 1141 - -
Lapu7g01489 1149 MobiDBLite consensus disorder prediction 478 518 - -
Lapu7g01489 1149 MobiDBLite consensus disorder prediction 592 608 - -
Lapu7g01489 1149 MobiDBLite consensus disorder prediction 1111 1127 - -
Lapu7g01489 1149 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 76 IPR013083 -
Lapu7g01489 1149 MobiDBLite consensus disorder prediction 214 305 - -
Lapu7g01489 1149 MobiDBLite consensus disorder prediction 224 262 - -
Lapu7g01489 1149 MobiDBLite consensus disorder prediction 670 723 - -
Lapu7g01489 1149 MobiDBLite consensus disorder prediction 687 723 - -
Lapu7g01489 1149 SMART PHD_3 26 69 IPR001965 -
Lapu7g01489 1149 MobiDBLite consensus disorder prediction 827 841 - -
Lapu7g01489 1149 SUPERFAMILY FYVE/PHD zinc finger 15 73 IPR011011 -
Lapu7g01489 1149 MobiDBLite consensus disorder prediction 422 443 - -
Lapu7g01489 1149 MobiDBLite consensus disorder prediction 621 635 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01489 25 68 PHD Transcription Factor Family AT5G22260 44.681 3.87e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01489 - - gmx:100810855 1831.99