Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01477 ATGGAAAACAATAGCCACCAACACCATCACACCAACCAAATCTCAACCTCCAATTTTCATGGTTTCTCTTCCAAACCCAGTTGCAGTGAGCAGAGAAGGGTTCTCGATCTCGATTTAAATGAACCCAAAATCGATGTAATCGCTTCTCCTCCTCTTATTGACATCAATTTGGTTCCGATTTCTGAGGTTTCTGCTGAGAATAATTTCCTCGTGGCAACGGAAACATCGGATTTGTTACCTGCGCCTCCTGCACATGTTGTTGAACAAGTGCATCGCTCCAATTCCGATGATGACACAGCAGTGAAGTTTCCATTTGATCTTAATACTAAACTTGAGGAGGAGGATTCAATTTCTTGCACTGAGGAAGCAGGTGCCAAAGTTGGTGAAACTTTACCTTCCACTCAATTGAAGGTCACACCGCAAGATCTTCTTCCTACAAACATGGACAATGAAGATAGAGCAAGTGCTGTCGAAGGAGGAACAGCTACCTCTGAAAGCAGGAAAAGAAAGAGGTGTATGGAGGATTATGAGAGAGGGAGTGGGAGGTCTTTTCGCGGAAAAACATTGACTGTAAATGTTGAAAGCCGAAGGAAGACCATAGTGGACGATGGTTATCGTTGGCGAAAATATGGCCAAAAAACTATAAAGGGAAATTTGTTCCCTAGGGCCTACTACAAATGCACAAGTTCTGGGTGTTGTGTAAGGAAGCATGTGGAACGAGATTCACGCAACAAAAAGAATGTGATCACTACTTATGAGGGAAAACACAATCATGAACAACCATCCCCTAAGAACCCTAATGAGAAACACTGTGAAGAGGATGAAGTGGATGAAGATGAAGAAGTTGAGAGAGAAGAACTTGCTACTGCTGCATCCAATGCTCTGTTCAATTTTCAACTATCTGGGAGTAGGAATTTTCTCAACACTTTACACCCTGCACAACCTCGACTTCACACTCTTCAACCATTTGGTGATGACACAAATCCAGGATTTGGCAATGCTAGGTCTGTGTGGCCAAACCCTTTTGGAAGTTTCAACAACAACATGAATATTGGGTGGTCTTCCTCTTACACCTCCCAAATGCATTATTCTTCTTTGTTCAATAATACCAATACTGTGCCTTACCGTTTCTATGGACTTGACCTTAACCGTTATGCTGCCCTTCAACCCGAGTTTCCAGTGCCACCACCCTTTAACATTCCTTCTTCTTCTTCTGAAGTTTTTTCTCGGGCTAGGCTTAATGCTAATGGATCCAGTTCAGTCTTTCCTTTAAGGGAAATGGGGGCAATATATCGCAGATTGTATTAG 1308 0.4266 MENNSHQHHHTNQISTSNFHGFSSKPSCSEQRRVLDLDLNEPKIDVIASPPLIDINLVPISEVSAENNFLVATETSDLLPAPPAHVVEQVHRSNSDDDTAVKFPFDLNTKLEEEDSISCTEEAGAKVGETLPSTQLKVTPQDLLPTNMDNEDRASAVEGGTATSESRKRKRCMEDYERGSGRSFRGKTLTVNVESRRKTIVDDGYRWRKYGQKTIKGNLFPRAYYKCTSSGCCVRKHVERDSRNKKNVITTYEGKHNHEQPSPKNPNEKHCEEDEVDEDEEVEREELATAASNALFNFQLSGSRNFLNTLHPAQPRLHTLQPFGDDTNPGFGNARSVWPNPFGSFNNNMNIGWSSSYTSQMHYSSLFNNTNTVPYRFYGLDLNRYAALQPEFPVPPPFNIPSSSSEVFSRARLNANGSSSVFPLREMGAIYRRLY* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01477 435 SMART WRKY_cls 201 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu7g01477 435 MobiDBLite consensus disorder prediction 142 172 - -
Lapu7g01477 435 Pfam WRKY DNA -binding domain 202 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu7g01477 435 MobiDBLite consensus disorder prediction 8 25 - -
Lapu7g01477 435 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 100 279 IPR044810 GO:0003700
Lapu7g01477 435 FunFam WRKY transcription factor 190 262 - -
Lapu7g01477 435 SUPERFAMILY WRKY DNA-binding domain 198 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu7g01477 435 ProSiteProfiles WRKY domain profile. 196 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu7g01477 435 MobiDBLite consensus disorder prediction 1 25 - -
Lapu7g01477 435 Gene3D WRKY domain 186 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu7g01477 435 MobiDBLite consensus disorder prediction 251 271 - -
Lapu7g01477 435 MobiDBLite consensus disorder prediction 251 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01477 Lapu-Chr7 30157842 30161352 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01477 164 264 WRKY Transcription Factor Family AT5G56270 55.882 1.18e-27 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu7g01477 WRKY 1.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01477 K18835 - vun:114191352 484.182