Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01476 ATGTCCACTTCCATTGAAAACAAGCACCATCACATCACTGTAACCACAGCATGCAATTCTGCAGAAAGGGGCTTTCATGGTTTCTCTGCCAAGGAGAGAAGGGCTTTGGATTTCGATTTGAATGAGCCTATAATCAATAAAAACCCTGAGGCTTCTCTTCCTTGTATTGATGTCAATTTGGTTCCAATTTCTCAGGTTTCTAATGAGAATAGTCTTGTGGCAATGTGCCAAACTCTTGCTCCCGAGTTGGATCTGTCAAATGCTCCTCTTAAGAAAGTTGTTGAACAAGTGCATTCGTCCAATTCCAATGATGAGAAAATGGTGAAGTTTCCCTTTGATCTTAACGCAAAATTTGATGAGGAAGATCAAATTTCTAGTTCCAAGGAAGCACATGCCATTGGTGGCAGGAGTGAAGCCATTCAACCTTTAGCTTCCACTTATTTGGAGGTGTCTTCGGAAGATGTTCTTCCTACAGACAATGATAATGAGGATAGAGCCAGTGCTGTTGGGGGAGGATCAAGCAGTTCTCAGAGCAGGAAGAGAAAGAGATCCCTTGAGGAATATGAGAAAGGGAGAGGGAAGGGTTTTCTTAGAGACAATGTGGAAGTGAAGATTAAGAGACAAAAAGATAACACAGTAGATGATGGTTATCAATGGAGAAAGTATGGTCAAAAGCCTATTAAGGGAAATCTATTCCCCAGGGCCTACTACAAATGCACAAGTGCTGGGTGTTCTGTAAAGAAGCACGTGGAACGTGATTCGAACAACCAAAAAAATTTAATCAGTACTTATGAGGGAATACACAATCATGAACAACCAACCTTTAGGAACCCTAGCAAACAATGTGTGGACGATGAAGAAGAGGAAGAGCTTGCTGCTGTTGCTGCAGCCAATACTCTGTTGACCTTCGGTTCACATGGGACTAGGAATTTTTTGAGTGCCCCAAACCTTGCAGAACCTGGAGTTCACACTCCTCAACTACTCCCCAATGACCCAAATCCTGAATTTTTCAATAGGTTCATGAGACCCCACCATTTTGGAAGTTTCAATAATAACATGAACATTGGATCTTCCTCCTACACTCCCCAAATGCATTATTCTTCTTTCTTGAATAATGCCATTACCATGCCTTACCGTTCCTATGGACTTAACCTTGACCCTTATGTTGCCCTTCAACCTAGGTTTCCAATTCCACCACCATTGAACATGCCTTCTTTTGGAGGTTTTTATCAGGATTGGCTTAATGCTAATGGGCCCAGTTCAGTGTTTCCTTTCAGAGAAACCAGTGCAAGAGATCGTAGCTGGCACTAG 1311 0.4226 MSTSIENKHHHITVTTACNSAERGFHGFSAKERRALDFDLNEPIINKNPEASLPCIDVNLVPISQVSNENSLVAMCQTLAPELDLSNAPLKKVVEQVHSSNSNDEKMVKFPFDLNAKFDEEDQISSSKEAHAIGGRSEAIQPLASTYLEVSSEDVLPTDNDNEDRASAVGGGSSSSQSRKRKRSLEEYEKGRGKGFLRDNVEVKIKRQKDNTVDDGYQWRKYGQKPIKGNLFPRAYYKCTSAGCSVKKHVERDSNNQKNLISTYEGIHNHEQPTFRNPSKQCVDDEEEEELAAVAAANTLLTFGSHGTRNFLSAPNLAEPGVHTPQLLPNDPNPEFFNRFMRPHHFGSFNNNMNIGSSSYTPQMHYSSFLNNAITMPYRSYGLNLDPYVALQPRFPIPPPLNMPSFGGFYQDWLNANGPSSVFPFRETSARDRSWH* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01476 436 ProSiteProfiles WRKY domain profile. 208 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu7g01476 436 FunFam WRKY transcription factor 202 274 - -
Lapu7g01476 436 Gene3D WRKY domain 198 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu7g01476 436 SUPERFAMILY WRKY DNA-binding domain 209 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu7g01476 436 Pfam WRKY DNA -binding domain 214 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu7g01476 436 MobiDBLite consensus disorder prediction 155 191 - -
Lapu7g01476 436 SMART WRKY_cls 213 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu7g01476 436 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 86 289 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01476 Lapu-Chr7 30144807 30148777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01476 133 276 WRKY Transcription Factor Family AT5G56270 37.888 6.92e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu7g01476 WRKY 7.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01476 K18835 - var:108323080 467.618