Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01461 ATGAATTGCTTCCCTTGTTGCGCCCCTAAGAAAAGCCCAAGCAAGAGGGAGCATGATTCTCCACCCCCCCCCGAACCTGTAGCTGTAAAAGCACCAGAAATGAAGAAACAAAAACCCGACGAGCCAATCCCAGTTGAGACTGAAAATATTAAGGTACAGTCTTTCACGTTCCGTGAGCTAGCAACAGCAACAAAGAATTTCCGACAGGATTGCCTGTTGGATGAAGGATGTTTCGGCAGAATATACAAAGGAATAATTCCTGCCACCGGCCAGGTCGTGGCCGTGAAGCAACTCGACCGAAATGGGATCCAAGGCAGTAAGGAATTTCTGGCTGATGTTGCGGAGCTAAGCCTCTTGCAGCATGAAAATCTGGTCACTCTCATTGGTTATTGTGCCGATGGAGATCAACGTCTTTTGGTTTACGAGTACTTTTCTGGGCGCACTCTTGAAAACCGTCTTTTTGAGAATAAAGCGGATGAAGGACCACTAGGTTGGTATGACAGAATGAAAGTAGTAGCGGCTACTTCTAAAGGGATAGAGTATTTGCATGAGACGGCGAACCCCCCAGTTATATTCAGGGACATGAAAGCGTCGAGCATCTTGGTGGACGATGATTTAAATTCTAAACTACGTGATGTTGGAATGGCCAAGCTTTCTGGTGGAGACAAGATGAACAATGGACCTCCAAGACTTATGGGCACCTATGGTTACTGCGCTCCGGAGTATGTGAGAGCAGGTCAAGTCACCATGAAATCAGACGTATACAGTTTCGGAGTTATCTTGCTAGAGCTCATTACTGGACGAAGAGCCATTGACACCACACGACCAAATGAAGAGCAAAATCTAGTTTCATGGGCTACACCCATATTCAGGGATCCGAAGAGATATCCAGACATGGCAGATCCGCTTCTTAATAAAAATTTCCCAGAAAAAGATCTGAATCAAGTTGTTGCAATAGCGTCCATGTGCTTACAGGAGGAAGCAGAAGCTCGTCCTTTGATCAGTGACGTTGTAACTGCTCTCAGTTTTCTTTCCGATGCTCCTGTTTCTGCACCCGTAAAGAGTTGCGCTGGTGAAAGCGAAAGTGAAGCAGTATCTAGAAAGGGGAGCCGTAGATCATCAGTGGATAGCCGCCATGGTTCTGATGACCAACTTCCCCCAGCGATTTCCTCTAAACCTAGCCGCAAAAGCAGCAGTAGATCGAGGAAGGGAACACCCAGTTCAGATTCTGGAGATGGAAGCGTTTCTTCCAGCAGTAGGAAATCGGAGGGTGATTCAAGCCGCAAGAGCAGCAAAAAGTATTCTCTGAAAATGTTAAGCCAGAAGAGCAGCAAAAAGTGTTCTGAGGAAGATTTAAACAGGAAGAGCAGCGAAAAATCTTCTGAAGAAGATTTAAGCCGGAAGAGCAGCAAAAAGTCTTCCATTGAGCCTCAAGAGCAGTAA 1443 0.4615 MNCFPCCAPKKSPSKREHDSPPPPEPVAVKAPEMKKQKPDEPIPVETENIKVQSFTFRELATATKNFRQDCLLDEGCFGRIYKGIIPATGQVVAVKQLDRNGIQGSKEFLADVAELSLLQHENLVTLIGYCADGDQRLLVYEYFSGRTLENRLFENKADEGPLGWYDRMKVVAATSKGIEYLHETANPPVIFRDMKASSILVDDDLNSKLRDVGMAKLSGGDKMNNGPPRLMGTYGYCAPEYVRAGQVTMKSDVYSFGVILLELITGRRAIDTTRPNEEQNLVSWATPIFRDPKRYPDMADPLLNKNFPEKDLNQVVAIASMCLQEEAEARPLISDVVTALSFLSDAPVSAPVKSCAGESESEAVSRKGSRRSSVDSRHGSDDQLPPAISSKPSRKSSSRSRKGTPSSDSGDGSVSSSSRKSEGDSSRKSSKKYSLKMLSQKSSKKCSEEDLNRKSSEKSSEEDLSRKSSKKSSIEPQEQ* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01461 480 ProSiteProfiles Protein kinase domain profile. 67 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01461 480 MobiDBLite consensus disorder prediction 351 480 - -
Lapu7g01461 480 Gene3D Phosphorylase Kinase; domain 1 28 143 - -
Lapu7g01461 480 Gene3D Transferase(Phosphotransferase) domain 1 145 354 - -
Lapu7g01461 480 MobiDBLite consensus disorder prediction 1 41 - -
Lapu7g01461 480 FunFam Serine/threonine-protein kinase PBS1 144 358 - -
Lapu7g01461 480 MobiDBLite consensus disorder prediction 443 480 - -
Lapu7g01461 480 PANTHER OS07G0668900 PROTEIN 3 352 - -
Lapu7g01461 480 Pfam Protein kinase domain 73 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01461 480 SUPERFAMILY Protein kinase-like (PK-like) 43 344 IPR011009 -
Lapu7g01461 480 MobiDBLite consensus disorder prediction 387 421 - -
Lapu7g01461 480 FunFam probable serine/threonine-protein kinase RLCKVII 40 143 - -
Lapu7g01461 480 MobiDBLite consensus disorder prediction 364 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01461 Lapu-Chr7 30028651 30030973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01461 1 352 Glycoside Hydrolase AT3G07070 56.720 1.85e-147 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lapu7g01461 Pkinase 3.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01461 - - pvu:PHAVU_007G115500g 714.916