Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01452 ATGGCTTCTCTCTCATGCTCCTCCACCCTAGCTACACTCGTCAACCACACCGCCGCAGCCAACTACCTCTGCAACCAACTCGATTCCATTTCCACAAGGCTCAACGACACCACCTACGCGGTCGACAACACCTACCTTCTTTTCTCCGCCTATTTGGTCTTCGCCATGCAGCTTGGTTTCGCCATGCTCTGCGCCGGATCCGTCCGAGCAAAGAACACCATGAACATCATGCTCACCAACGTCCTTGACGCCGCCGCAGGCGGCCTCTCCTACTACCTCTTCGGCTTCGCTTTCGCTTTCGGCGCCCCTTCCAACGGCTTCATCGGCCGCCACTTCTTCGGCCTCACAGACTACCCCATTCCCACCGCCGACTACAGCTTCTTCCTCTACCAGTGGGCCTTCGCCATCGCCGCCGCTGGAATAACCAGCGGCTCCATCGCCGAGAGAACGCAATTCGTGGCTTACCTCATTTACTCTTCCTTTTTAACTGGGTTCGTTTACCCCGTCGTTTCGCATTGGTTCTGGTCGGCGGACGGTTGGGCCAGCGCCACCAGAACCGACGGGAACGTCTTGTTTGGGTCTGGCGTCATCGACTTTGCGGGCTCCGGCGTGGTTCATATGGTTGGTGGCATAGCGGGCCTGTGGGGGGCATTAATTGAAGGCCCGAGGATCGGGCGGTTCGACCGGACGGGCCGATCTGTTGCACTGCGCGGGCACAGCGCGTCGTTGGTTGTGCTGGGTTCGTTTCTATTATGGTTCGGGTGGTACGGGTTCAACCCCGGTTCGTTTTTTACTATAGCGAAGGGGTATGGCGGCACGAGTTATTATGGTCAGTGGAGTGCGATAGGGAGGACAGCTGTCACGACGACATTGGCTGGGAGCACAGCGGCTTTGACGACGCTGTTCAGCAAGCGGTTATTGGTGGGCCATTGGAACGTGATCGACGTGTGTAACGGCCTGCTTGGCGGGTTCGCTGCCATCACCTCGGGCTGTGCGGTGGTGGAGCCGTGGGCCGCGATAGTGTGTGGGTTTGTGGCTGCCTGGGTTTTGATTGGGCTTAATAAGCTGGCAGCGAAAGTGGAGTACGATGACCCCTTGGAGGCGGCGCAACTTCACGGCGGGTGTGGCGCCTGGGGGGTGTTGTTCACGGGGTTGTTTGCGAAGAGGAAGTACGTGGAGGAGATTTATGGAATTGGGAGGCCGTGGGGGGCGTTGATGGGCGGCGGCGGGAAGTTGGTGGCGGCGCAGTTGATTCAGATAGTGGTGGTGTGTGGGTGGGTTACGGCGACGATGGGACCGTTGTTCTACGGGCTTCATAAGATGAAGCTGTTGAGGATATCCAGAGACGATGAAACTGCAGGGATGGATTTGACTAGGCATGGAGGATTTGCTTATGCGTACCATGACGATGAAGATGGTTCTAGCAGGGGCGTAGGATTGATGATGCGTAAAATAGAACCTACCAGTACTTCTCCCTCTCCCCCTGCAGCACCACATCTCTCACTTCATCATCCATCCATATCTTCTCTTTAG 1533 0.5708 MASLSCSSTLATLVNHTAAANYLCNQLDSISTRLNDTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNGFIGRHFFGLTDYPIPTADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSADGWASATRTDGNVLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRTGRSVALRGHSASLVVLGSFLLWFGWYGFNPGSFFTIAKGYGGTSYYGQWSAIGRTAVTTTLAGSTAALTTLFSKRLLVGHWNVIDVCNGLLGGFAAITSGCAVVEPWAAIVCGFVAAWVLIGLNKLAAKVEYDDPLEAAQLHGGCGAWGVLFTGLFAKRKYVEEIYGIGRPWGALMGGGGKLVAAQLIQIVVVCGWVTATMGPLFYGLHKMKLLRISRDDETAGMDLTRHGGFAYAYHDDEDGSSRGVGLMMRKIEPTSTSPSPPAAPHLSLHHPSISSL* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01452 510 Pfam Ammonium Transporter Family 45 465 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lapu7g01452 510 SUPERFAMILY Ammonium transporter 39 446 - -
Lapu7g01452 510 FunFam Ammonium transporter 23 480 - -
Lapu7g01452 510 PANTHER AMMONIUM TRANSPORTER 13 461 - -
Lapu7g01452 510 NCBIfam ammonium transporter 42 465 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lapu7g01452 510 ProSitePatterns Ammonium transporters signature. 198 223 IPR018047 GO:0008519|GO:0016020|GO:0072488
Lapu7g01452 510 MobiDBLite consensus disorder prediction 485 510 - -
Lapu7g01452 510 Gene3D Ammonium transporter AmtB like domains 17 481 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01452 Lapu-Chr7 29949091 29950862 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01452 21 494 Inorganic Solute Cotransporters AT1G64780 80.753 0.0 792
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01452 K03320 K07573 gmx:100797209 870.152