Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01448 ATGGAGTTAGACCAGGAGGTTGGGATAATGAACAAACAAAAGGAAGCAAGTTTGCATGTTAGGATGCTGACTAGGGAAATTAGGAAGTCTATTGATAAGCATACCATATTGTACACCACCCTTATAGAACTTTCAAAGACATTGAATTTGCATAATTGTGTAGTTTGGATGCCAAATGAGGACCAACAAGAGATGCATTTAACTCATGAGTTGAAAACGAACTTGAGAAGGAATTTCCAAAATGTTATTCCTATGAATGATGTTGATGTATTGGAGATAATAAAGACTAAAGGGATGAAGACTTTAAGGCCTGATTCTGCTTTAGGAGTAGCAAGTGGTGGTGGCTCTAGGGAGTTGGGTGTCGTGGCAGCTATTCGCATGCCATTACTTAATGTATCAAATTTCGAAGGAGGGACTCCAGAATTGGTCGAGACATGTTATGCTATATTGGTTTTGGTTCTTCCATGTTCAGGCACTAGGATTTGGACCTACCATGAGATGAAGATAGTTGAAGTTGTTGCTGACCAGGTGGCTGTCGCCTTGTCTCATGCATCGATTCTAGAAGATTCCCAACAGATGAGACAAAGGTTGGAAGAGCGAAATCAAGCACTGCAACAAGCTAAAAATAATGCAATAATGGCCATCCAGGCGAGGAAGTCACTTCAGAAGGTGATGAGTGATGGAATGCAAAGACCCATGCATTCTATTATAGGGATGCTTTCATTGCTTCAAGAGGATAATTTGAGATCTAACCAGAAGATTCTTGGCAATACAATGTTGAAAGTTGGCCATGTGATTTCAGGTTTGATTAATGATGTGATGGAGGTTTCAGACAATGAAAATGGAGGCTTCCAGTTAGAGATGAAACCTTTTCTTCTACATTCCATGCTGAGGGAAGTTGTTTGCATTGCCAAGTGCCTATGTGTTTGTGAAGGCTTTGGTTTTGAAATTGATGTTCAAAAGTCTTTGCCTAACACAATTATAGGTGATGAGGCAAGGACTTTTCAAGTAATTTTACACATCATTGGCTATTTATTAAACATGAAAGATAAAGGAACTCTTAACTTTCGAGTTTTTCTGGAAAGAGACAGTGGAGGTAAGGATGATGAAAATTTTGGAATATGGAGATCAAGTGGTCATAATGAGTACGTTCCAATAAAATTAGATTTTCATGTTACTGTTACTTCTCAGTCGGAGGTAAATTCAACAATACATGATACTGGAAAGAGGCAATACTACAATGACGAACCTAAAGATGGTCTTAACTTCAACATGTGTAAAAAGTTGGTGCAGATGATGCAAGGCAATATTTGGATAACATCGAACTCCCTAGGTCTGATACAAGGCATGACACTTTTTCTCAAGTTTCAGACAGGACCATCACTTGAAAAATCCATGCTTGCACCTAAAGATTATTCAAACTCACAGCTGAAGGGCCTCAATGTTATGCTAGCTGAGAATGATGGCATAAACAGGGTTGTGACTAAGAAGCTACTTGAGAAACTTGGTTGTCAAGTAACGACTGTTTCATCAGGGATTGAGTGTCTGAGTGCTATCAGTGGCACTACAAACCCATTCAAGATTATCTTAATAGATCTTCACATGCCTAAAATGGATGGTTTTGAAGTGACAAAGAAGATCAGAAAGTCTCACAGTCATTGGCCTTTGATTGTAGCTTTTATAACAAATGCAGGAGAACATGTGAGGGAGAAATGCCTACTTGCAGGAATGAATGGACTGATCCAGAAACCTATTACCCTTCACCAGATGGCTTATGAACTTAAAGCAATTCTACAAAGAGCAGGTGAAAAACTTTGA 1818 0.3894 MELDQEVGIMNKQKEASLHVRMLTREIRKSIDKHTILYTTLIELSKTLNLHNCVVWMPNEDQQEMHLTHELKTNLRRNFQNVIPMNDVDVLEIIKTKGMKTLRPDSALGVASGGGSRELGVVAAIRMPLLNVSNFEGGTPELVETCYAILVLVLPCSGTRIWTYHEMKIVEVVADQVAVALSHASILEDSQQMRQRLEERNQALQQAKNNAIMAIQARKSLQKVMSDGMQRPMHSIIGMLSLLQEDNLRSNQKILGNTMLKVGHVISGLINDVMEVSDNENGGFQLEMKPFLLHSMLREVVCIAKCLCVCEGFGFEIDVQKSLPNTIIGDEARTFQVILHIIGYLLNMKDKGTLNFRVFLERDSGGKDDENFGIWRSSGHNEYVPIKLDFHVTVTSQSEVNSTIHDTGKRQYYNDEPKDGLNFNMCKKLVQMMQGNIWITSNSLGLIQGMTLFLKFQTGPSLEKSMLAPKDYSNSQLKGLNVMLAENDGINRVVTKKLLEKLGCQVTTVSSGIECLSAISGTTNPFKIILIDLHMPKMDGFEVTKKIRKSHSHWPLIVAFITNAGEHVREKCLLAGMNGLIQKPITLHQMAYELKAILQRAGEKL* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01448 605 FunFam Ethylene receptor 4 184 278 - -
Lapu7g01448 605 SMART gaf_1 32 191 IPR003018 GO:0005515
Lapu7g01448 605 Gene3D - 10 182 IPR029016 -
Lapu7g01448 605 ProSiteProfiles Response regulatory domain profile. 481 598 IPR001789 GO:0000160
Lapu7g01448 605 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 2 602 - -
Lapu7g01448 605 Pfam Response regulator receiver domain 482 590 IPR001789 GO:0000160
Lapu7g01448 605 CDD HATPase_ETR2_ERS2-EIN4-like 323 454 - -
Lapu7g01448 605 Gene3D - 183 280 - -
Lapu7g01448 605 Coils Coil 187 214 - -
Lapu7g01448 605 CDD HisKA 215 277 IPR003661 GO:0000155|GO:0007165
Lapu7g01448 605 SUPERFAMILY CheY-like 476 600 IPR011006 -
Lapu7g01448 605 CDD REC_ETR-like 480 594 - -
Lapu7g01448 605 Gene3D - 463 601 - -
Lapu7g01448 605 Pfam GAF domain 34 181 IPR003018 GO:0005515
Lapu7g01448 605 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 202 283 IPR036097 GO:0000155|GO:0007165
Lapu7g01448 605 ProSiteProfiles Histidine kinase domain profile. 224 460 IPR005467 -
Lapu7g01448 605 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 286 442 IPR036890 -
Lapu7g01448 605 SUPERFAMILY GAF domain-like 35 184 - -
Lapu7g01448 605 SMART REC_2 480 594 IPR001789 GO:0000160
Lapu7g01448 605 Gene3D - 281 459 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01448 Lapu-Chr7 29925016 29928038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01448 1 603 Miscellaneous Gene Families AT3G04580 52.427 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu7g01448 GAF 3.3e-11 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01448 K14509 - gmx:100101892 956.822