Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01446 ATGGCCAACCGGTGGTGGACCGGCTCTGTGGGTCTAGAGAACTCGGGTGACTCCATGAGAAAACCGGATCTGGGGTTTTCCATGAACGAGAGTGCGGTCACTGGGAACCACGCGGGGGAAGAAGAAGAGGACAAAGAAAACAGCGACGAGCCCAAAGAGGGAGCTATTGACGTGGCCAACACGCGCCGCCCTAGGGGTCGTCCACCAGGCTCCAAGAACAAGCCCAAACCGCCGATATTCGTCACCCGTGACAGCCCTAACGCGCTCCGAAGCCACGTCATGGAGATAGCCAGCGGCGCAGACATCGCCGACTGCGTGGTCCAGTTCGCGCGGAGGCGCCAGCGCGGCGTGTCCATTCTCAGCGGCAGCGGGGCTGTCGTCAACGTCACTCTCCGCCAGCCCGCGGCGCCTGGCGCCGTTATGGCTCTCCACGGCCGCTTCGACATCCTCTCCCTCACCGGCTCGTTTCTCCCCGGACCGTCCCCGCCTGGTGCCACCGGTCTCACCATCTATCTTGCGGGAGGCCAGGGACAGATCGTGGGCGGCGGGGTGGTGGGTCCGCTGGTGGCGGCGGGTCCAGTTTTGATAATGGCGGCTACGTTTTCCAATGCAACGTACGAGAGATTGCCCTTGGAGGAGGATGATCAGGAGCAGGGCGGTGGCGGCGGGTCTCCACCGGGGATGGGAGGCGGTCCCGGCGAAGCGTCGTCATCAATTTCAGTGTATAATAATAATGTTCCTCCGAGTTTGGGTCTTCCGAATGGACAACAGGTGAACCATGAGGCATATTCTTCTCCTTGGGGTCATGCTCCTCATGCCAGACCTCCTTACTAG 834 0.6151 MANRWWTGSVGLENSGDSMRKPDLGFSMNESAVTGNHAGEEEEDKENSDEPKEGAIDVANTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEIASGADIADCVVQFARRRQRGVSILSGSGAVVNVTLRQPAAPGAVMALHGRFDILSLTGSFLPGPSPPGATGLTIYLAGGQGQIVGGGVVGPLVAAGPVLIMAATFSNATYERLPLEEDDQEQGGGGGSPPGMGGGPGEASSSISVYNNNVPPSLGLPNGQQVNHEAYSSPWGHAPHARPPY* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01446 277 MobiDBLite consensus disorder prediction 1 85 - -
Lapu7g01446 277 FunFam AT-hook motif nuclear-localized protein 89 216 - -
Lapu7g01446 277 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 215 - -
Lapu7g01446 277 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 34 268 IPR014476 GO:0003680
Lapu7g01446 277 Pfam Plants and Prokaryotes Conserved (PCC) domain 90 203 IPR005175 -
Lapu7g01446 277 PIRSF ESCAROLA 12 277 IPR014476 GO:0003680
Lapu7g01446 277 Gene3D - 89 218 - -
Lapu7g01446 277 MobiDBLite consensus disorder prediction 213 277 - -
Lapu7g01446 277 ProSiteProfiles PPC domain profile profile. 86 226 IPR005175 -
Lapu7g01446 277 MobiDBLite consensus disorder prediction 236 263 - -
Lapu7g01446 277 CDD DUF296 90 173 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01446 Lapu-Chr7 29905441 29906280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01446 1 277 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 56.040 7.53e-90 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01446 - - gmx:100795097 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01446 7 29905441 29906280 Lapu7g01446 7 29905441 29906280 ECH