Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01443 CAGGAAGTGCTTCTTCATTCCTACGAAGAAACACCGTCTATACCTCGTTATGAAGAGAAACATAAGGTTTCCTACAGAGGGGTTCGAAGGCGCGGACGAGGCAACTACGCGGCGGAGATAAGGGACTCTACGAGGAACGGAGCGAGGGTTTGGTTGGGAACCTTCGACACTGCGGAGGATGCTGCTTTGGCTTACGACCAAGCTGCAATAACAACGCGTGGCGACAACGCTGTTCTCAATTTCCCTCCTCAACTCGTTCTGCAATCGCTTCACAACATGGACTTCAGGTTCCAGAGAGGGCTGTCTCCCGTTCTGGAACTGAAAAAGAGAAACTTCATGAAGAGGAGGGTGGAGTGCGGGAAGAGAAAGAATCACAGACATATTGGAATGGAAAATATTGTGGTTTTGGAAGATCTGGGAGCAGATTATTTGGAAGAACTTCTCACACTGTCTGAACATTAA 462 0.4848 QEVLLHSYEETPSIPRYEEKHKVSYRGVRRRGRGNYAAEIRDSTRNGARVWLGTFDTAEDAALAYDQAAITTRGDNAVLNFPPQLVLQSLHNMDFRFQRGLSPVLELKKRNFMKRRVECGKRKNHRHIGMENIVVLEDLGADYLEELLTLSEH* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01443 153 SMART rav1_2 24 88 IPR001471 GO:0003700|GO:0006355
Lapu7g01443 153 PANTHER DNA-BINDING DOMAIN 19 146 IPR044808 GO:0003700|GO:0009873
Lapu7g01443 153 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
Lapu7g01443 153 SUPERFAMILY DNA-binding domain 25 83 IPR016177 GO:0003677
Lapu7g01443 153 Gene3D AP2/ERF domain 24 83 IPR036955 GO:0003700|GO:0006355
Lapu7g01443 153 FunFam Ethylene-responsive transcription factor 2 23 84 - -
Lapu7g01443 153 CDD AP2 36 84 IPR001471 GO:0003700|GO:0006355
Lapu7g01443 153 PRINTS Ethylene responsive element binding protein signature 48 64 IPR001471 GO:0003700|GO:0006355
Lapu7g01443 153 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Lapu7g01443 153 ProSiteProfiles AP2/ERF domain profile. 24 82 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01443 Lapu-Chr7 29888992 29889453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01443 20 153 AP2-EREBP Transcription Factor Family AT3G23240 55.072 8.41e-49 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu7g01443 AP2 5.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01443 K14516 - rcu:8268206 163.696