Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01424 ATGCAAACCCACCTGCTGTTCTTCTTCTATTGTTACATTGGCCTCACACTTGCTTTTACTGAAGCTGCAGCAGCAGATGATGAATTGTCAACTCTTCTCTCAATCAAATCCACTCTCATTGACCCGATGAGGCATCTGAAGGATTGGCAACTTCCAAGCAACATGACACCAGTAGGATCTCCCCATTGTAACTGGACTGGAGTTGGTTGCAACTTTAAAGGCTTTGTAGAGAGTCTTGACCTCTCCAACATGAACCTCAGCGGTCGTGTTTCGGACCACATTCAATCTCTTTCAAGTCTGTTTTCTTTCAATATAAGCTGTAACAACTTTGCTTCATCACTGCCCAAATCACTGTCCAACCTCACCTCTCTCAAGAACTTTGATGTGAGCCAGAACTACTTCACTGGCAGCTTCCCCACTGGTCTTGGAAGGGCTGCAGGCTTGAGATTAATCAATGCATCGAGCAATGATTTTTCAGGTTTTCTTCCAGAGGATATTGGAAATGCAACCTTGCTTGAGAGCCTTGATTTTCGAGGGAGCTACTTTGTGAGTTCAATCCCCAGGAGTTTTAGGAATTTGCAGAAACTCAAGTTTCTGGGCCTTTCAGGCAATAACTTCACAGGGAGGATTCCAGAATACCTTGGGGAACTAACTTCTCTGGAGACATTGATTATCGGATACAATTTATTTGAAGGTGAGATCCCTGTAGAGTTTGGCAACCTGACCAATCTTCAATACCTTGACTTGGCTGTAGGCAGTCTCAGTGGACAAATTCCAGCTGAATTGGGTAAGCTGACAAAACTCAACACAATTTACTTGTACCATAACAACTTCACAGGAAAGATTCCTCCTCAGCTTGGAGACATCACTTCACTGGCATATTTGGACCTCTCAGACAATCAGATCTCCGGAGAGATTCCAGAAGAACTTGCTAAATTGGAAAACCTGAAGCTCTTAAATCTGATGACGAACAGACTAACTGGTCTAGTGCCAGACAAGCTTGGTGAATTGAAAAATTTACAGGTGCTTGAGCTCTGGAAAAACTCCTTACATGGTCCTTTGCCACCAAAACTTGGACAGAACTCTCCTTTGCAGTGGTTGGATGTATCCTCTAACGAACTATCTGGTGATATCCCTCCAGGTTTGTGTACTGCAGGAAATCTCACTAAACTAATCCTCTTCAATAATTCATTCACTGGTTCTATTCCAAGTGGACTTGCAAACTGTTTGTCTTTGGTACGTGTTCGAATTCAAAACAATCTTATTTCTGGAGCTATTCCAGTTGGCTTCGGAAACCTCCTTGGCCTTCAACGGCTAGAATTCGCTAAGAACAACCTGACTGGGAAAATTCCCACTGATATTACCTCATCCACATCACTCTCTTTCATTGATGTCTCATGGAACCACTTTGAGTCATTTCTACCGTCAGATATTCTTTCTATTCCAACCCTTCAAACCTTCATTGCCTCTCATAACAATTTTGGAGGAAATATCCCTGATGAGTTCCAGGACTGTCCATCTCTCTCTGTATTGGACCTTTCAAACACCCATATATCTGGCACAATCCCTGAAAGTATTGCTTCTTGTCAAAGATTAGTGAACCTTAACCTTCGAAATAACCACTTGACAGGAGAAATCCCAAAATCAATCACAAGCATGCCCACTTTATCTGTTCTTGATCTGTCCAACAATTCATTGACCGGTAGGATTCCCGAAAACATAGGCAATTGCCCTGCTCTGGAAATGCTGAACCTGTCTTATAACAAACTTGAGGGTCCAGTACCCTCAAATGGGATGTTGGTGACCATAAATCCTAATGATCTTGTCGGCAATGAAGGTCTTTGTGGAGGCATTCTCCCTCCATGTTCTCCGAGGATGGATAACAATGAAGACTGGCCCTGGAGACTGGTAGCATTCCAGAGGATCAGCTTCACTAGTAGTGACATCCTGACTTGCATGAAGGAATCAAATGTCATAGGAATGGGGGGCACTGGTATCGTTTACAAAGCTGAAATCCATAGACCTCACGTAACCGTAGCAGTGAAGAAACTGTGGAGGTCACGGACAGACATAGAAGATGGCAATGATGTGTTGAGAGAAGTGGAACTCCTAGGGAGACTTAGGCACAGGAATATTGTAAGGCTTTTGGGGTATGTACACAACGAAAGGAATGTGATGATGGTTTACGAGTACATGCCTAACGGGAATCTTGGAACAGCACTGCATGGTGAACAATCTGCAAGGTTGCTTGTTGACTGGGTCTCAAGGTACAACATAGCTCTAGGAGTTGCACAAGGGCTTAACTACCTCCATCATGATTGCCACCCACCAGTTATTCACAGGGATATCAAGTCTAACAACATACTCCTTGACGCAAATTTAGAGGCGAGAATAGCAGACTTCGGGTTGGCGAGGATGATGATTCAAAAGAATGAGACAGTTTCCATGGTGGCTGGATCATATGGATACATCGCACCAGAATATGGATACACTCTGAAGGTCGACGAGAAGATTGACATATACAGCTATGGGGTGGTGCTTTTGGAGCTCCTAACTGGCAAAATGCCTTTAGACTCCTCGTTTGAAGAATCAACTGACATAGTAGAATGGATACGGAAGAAGAAAAGCAACAAATCCTTGTTAGAAGCACTGGATCCTGCCATAGCTAGTCAGTGTAAACATGTCCAAGAAGAAATGTTGCTTGTACTCCGGATTGCACTTCTATGTACCGCAAAGCTTCCCAAGGAAAGACCACCCATGAGAGACATCATCACAATGCTTGGTGAGGCAAAGCCAAGAAGGAAAAGTGTTTGCCATAATGGGGGTCAAGAAAGCAGTAGCATAGAAAAGTCCACAGTCTTTATCCCCTCCCCAGTTGTAAGTCTTTTGTAA 2892 0.436 MQTHLLFFFYCYIGLTLAFTEAAAADDELSTLLSIKSTLIDPMRHLKDWQLPSNMTPVGSPHCNWTGVGCNFKGFVESLDLSNMNLSGRVSDHIQSLSSLFSFNISCNNFASSLPKSLSNLTSLKNFDVSQNYFTGSFPTGLGRAAGLRLINASSNDFSGFLPEDIGNATLLESLDFRGSYFVSSIPRSFRNLQKLKFLGLSGNNFTGRIPEYLGELTSLETLIIGYNLFEGEIPVEFGNLTNLQYLDLAVGSLSGQIPAELGKLTKLNTIYLYHNNFTGKIPPQLGDITSLAYLDLSDNQISGEIPEELAKLENLKLLNLMTNRLTGLVPDKLGELKNLQVLELWKNSLHGPLPPKLGQNSPLQWLDVSSNELSGDIPPGLCTAGNLTKLILFNNSFTGSIPSGLANCLSLVRVRIQNNLISGAIPVGFGNLLGLQRLEFAKNNLTGKIPTDITSSTSLSFIDVSWNHFESFLPSDILSIPTLQTFIASHNNFGGNIPDEFQDCPSLSVLDLSNTHISGTIPESIASCQRLVNLNLRNNHLTGEIPKSITSMPTLSVLDLSNNSLTGRIPENIGNCPALEMLNLSYNKLEGPVPSNGMLVTINPNDLVGNEGLCGGILPPCSPRMDNNEDWPWRLVAFQRISFTSSDILTCMKESNVIGMGGTGIVYKAEIHRPHVTVAVKKLWRSRTDIEDGNDVLREVELLGRLRHRNIVRLLGYVHNERNVMMVYEYMPNGNLGTALHGEQSARLLVDWVSRYNIALGVAQGLNYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLARMMIQKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKMPLDSSFEESTDIVEWIRKKKSNKSLLEALDPAIASQCKHVQEEMLLVLRIALLCTAKLPKERPPMRDIITMLGEAKPRRKSVCHNGGQESSSIEKSTVFIPSPVVSLL* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01424 963 FunFam MDIS1-interacting receptor like kinase 1 653 735 - -
Lapu7g01424 963 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Lapu7g01424 963 SMART LRR_typ_2 193 217 IPR003591 -
Lapu7g01424 963 SMART LRR_typ_2 553 577 IPR003591 -
Lapu7g01424 963 SMART LRR_typ_2 337 361 IPR003591 -
Lapu7g01424 963 SMART LRR_typ_2 289 313 IPR003591 -
Lapu7g01424 963 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 172 922 - -
Lapu7g01424 963 Gene3D Ribonuclease Inhibitor 312 626 IPR032675 -
Lapu7g01424 963 FunFam MDIS1-interacting receptor like kinase 1 736 945 - -
Lapu7g01424 963 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 25 180 - -
Lapu7g01424 963 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 364 626 - -
Lapu7g01424 963 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 289 357 - -
Lapu7g01424 963 SUPERFAMILY L domain-like 364 616 - -
Lapu7g01424 963 SMART serkin_6 653 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01424 963 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 181 281 - -
Lapu7g01424 963 Gene3D Ribonuclease Inhibitor 27 147 IPR032675 -
Lapu7g01424 963 Gene3D Ribonuclease Inhibitor 252 311 IPR032675 -
Lapu7g01424 963 PRINTS Leucine-rich repeat signature 553 566 - -
Lapu7g01424 963 PRINTS Leucine-rich repeat signature 292 305 - -
Lapu7g01424 963 ProSiteProfiles Protein kinase domain profile. 653 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01424 963 Pfam Protein kinase domain 655 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01424 963 Pfam Leucine rich repeat N-terminal domain 25 71 IPR013210 -
Lapu7g01424 963 SUPERFAMILY Protein kinase-like (PK-like) 642 927 IPR011009 -
Lapu7g01424 963 Gene3D Transferase(Phosphotransferase) domain 1 736 951 - -
Lapu7g01424 963 ProSiteProfiles Leucine-rich repeat profile. 291 314 IPR001611 GO:0005515
Lapu7g01424 963 ProSitePatterns Protein kinases ATP-binding region signature. 659 683 IPR017441 GO:0005524
Lapu7g01424 963 Gene3D Phosphorylase Kinase; domain 1 653 735 - -
Lapu7g01424 963 Pfam Leucine rich repeat 531 590 IPR001611 GO:0005515
Lapu7g01424 963 SUPERFAMILY RNI-like 78 423 - -
Lapu7g01424 963 Gene3D Ribonuclease Inhibitor 151 251 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01424 Lapu-Chr7 29665608 29668965 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01424 1 963 Receptor kinase-like Gene Family AT1G08590 59.884 0.0 1136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu7g01424 Pkinase 4.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01424 - - gmx:100817339 1696.02