Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01421 ATGGAAGCCCCTCCTGGGGGAGTGGACGATATGACTAAACTGTCCTATTTGCATGAGCCAGGAGTCCTGCAGAACTTAAAGGCTAGATATGAATTGAATGAAATATACACTTATACTGGAAATATTCTGATTGCAATAAATCCATTCCAAAGACTACCTCATATTTATGGTGCGCACATGATGCAACAATACAAGGGAGCACCATTTGGAGAATTAAGCCCTCATGTATTTGCAGTTGCAGATGTTGCATATAGGGCGATGATTAATGAAGGAAAAAGCAATTCAATTCTAGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGCAGTACCTTGCTTTCTTAGGTGGCAGGGCTGGTACTGAAGGACGAACAGTTGAACAACAAGTTCTTGAATCAAATCCAGTTCTGGAAGCATTTGGGAATGCTAAAACTGTAAGGAATAACAATTCTAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGATAAAAGTGGAAGAATATCAGGAGCAGCCATCCGAACATATCTTCTAGAGAGATCTCGGGTTTGCCAAATTAATGATCCAGAAAGGAATTACCATTGCTTTTATCTTCTTTGCGCTGCTCCACAGGAGGAAATTGAGAAATACAAATTAGGAAATCCTAGATCGTTTCACTACCTTAACCAGTCAAAATGCTATGAACTGGCTGATATAAGTGATGCTCGTGAATACCTTGCCACTCGGAGAGCTATGGATATTGTTGGAATAAGTCAAAAAGATCAGGAAGCCATTTTTAGAGTTGTTGCTTCAATTCTTCATATTGGCAATATTGAATTTACCAAAGGAAAGGAAGTTGATTCATCGGTTCCAAAAGATGACAAAGCCAAATTCCACCTGCAAACAACTGCCGACCTTCTCATGTGTGATGTTGATGCCTTGGAAGACGCATTATGTAAGCGTGTCATGATCACCCCTGAAGAAGTTATAAAAAGGAGCCTTGACCCCCAAAGTGCTGCAGTAAGTAGAGATGGATTGGCAAAAACAATTTATTCTCGGCTATTTGACTGGCTGGTGGACAAGATTAATAATTCAATCGGACAAGACCCCAAATCTAAATCTTTGATTGGGGTTCTTGATATCTATGGTTTTGAAAGCTTTAAAGCTAACAGTTTCGAGCAATTTTGCATTAATTTCACAAATGAGAAGTTGCAGCAACATTTCAATCAGCACGTGTTTAAAATGGAACAAGAAGAATATACAAAGGAGCAGATCAATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATTGAGAAGAAACCTGGAGGAATCATTGCTCTCCTCGATGAAGCTTGCATGTTCCCGAAATCAACTCATGAAACATTTGCAAACAAGCTTTATCAAACATTTAAGAATCACAAGCGCTTTATTAAGCCAAAATTATCTCGAACGGATTTCACAATTGCTCATTATGCTGGGGAGGTACTATACCAGTCTGACCAATTCTTGGACAAAAACAAGGATTATGTGGTTCCAGAACATCAAGATTTATTGAGTGCTTCCAAATGTTCTTTTGTATCTGGCCTTTTTCCACCACTACCAGAAGAGTCATCAAAATCTTCCAAATTTTCTTCAATCGGTTCACGTTTTAAGCTACAACTACAAAGCCTCATGGAGACATTAAATTCTACAGAACCCCATTACATTAGATGTGTGAAACCAAACAACCGCCTCAAGCCTGCAATTTTTGAGAATGTCAATATTATGCAACAACTTCGGTGTGGTGGTGTTTTGGAGGCAATCCGAATCAGTTGTGCTGGGTACCCTACTCGCCGTGCTTTCTTCGAATTTATAAACAGATTTGGCCTCCTTGCCCCAGAGGCCATGGAACCAAACATTGATGAAAAGACTGGTTGCCAAAAGATTCTGGAAAAGATGGGGCTTAAAGGATACCAGATTGGAAAAACAAAGGTATTCTTGAGAGCAGGTCAGATGGCTGAACTAGATGCTCAGAGAGCTCAAGTACTTAGTAATGCAGCAAAAGTTATCCAACGGCGTGTACGAACCCATCAAGCTCGCAGACATTATCTTGCATTGCGTAAGAAGACCATATACGTACAGTCTCGGTGGAGAGGAAGGCTTGCATGCAAACTCTATGAGCATTTGAGAAGGGAAGCTGCTGCTAAGAAAATTCAAAAGAACATACGCAGATATGAAGCTAGGAAAGCCTATAAAGAACTTCATGTGTCAGTACTTACACTGCAACGAGCTATAAGGGCCACTGCTGCTCGCAAGCAATTCAGATTTAGGAAGCAGACTAAAGCTTCCATCATCATTCAGGCTAGGTGGCGGTGTCACAAAGCTGCCTTATATCATAAGAGGCTCAAGAAAGGTGCAATTGTTACACAGTGCAGATGGAGGGGGCGTGTAGCCAGGAGAGAACTTAGGAAACTGAAAATGGCTGCAAAAGAAACTGGTGCCCTACAAGAAGCAAAGGATAAACTTGAAAAACGAGTGGAGGAACTCACTTGGCGTCTCCAACTTGAAAAAGGTTTAAAGACCAATTTGGAAGAATCCAAAGCTCAGGAGATAGCAAAACTGCAGAATTCGTTGCAGGAGATGCAGAGCAAATTTGAAGAAACTAATGCTCTGCTCATCAAAGAACGAGAGACTGTAAAGAAAGTTGTTGAAGAAGCACCTCCTGTCATTAAAGAAACACAAGTTATTGTTGAAGATACACAGAAGATTGAGACACTGACAGCAGAAAATGAGACCCTAAAGACTTCACTTGAGTCAGAGAAACAGAAAGCTGATGACTTTGAAAGAAAATACAATGAAGCCCAAGCTTGTAGTGAAGAAAGAGGTAAAAAACTAGAAGACACGGAGAAGAAGGGTCGTCAGCTTCAAGAATCATTGACTAGGCTAGAAGAGAAGATTACTAATTTAGAATCAGAGAATCAGGTACTACGTCAACAAGCTGTGTCCATGGCACCTAATAAGTTCCTTTCAGGACGTTCAAGATCAATCATCCAGAGAACTGAAAGTGGTCATATTGTACCGGAAGCAAAGACACCTGTGTCTAATCAGGAAATGCATAGCGCATCAATGCACCGGAGGGAACCCTCTGACGGCTTGGATGATAAACCACAAAAGTCACTAAATGAGAAACAACAGGAGAATCAAGAGTTACTCATCAGATGTATTGCACAACATCTAGGCTTTGCTGGGAACAGACCAATTGCTGCATGTATCATATACAAATGCCTCTTGCACTGGCGATCGTTTGAAGTTGAGCGTACTAGTGTTTTTGATCGTATCATCCAAACTATTGGCCATGCAATTGAGACCCAGGATAATAATGATGTCTTGGCTTATTGGTTATCCAATGCCTCTACACTTCTCTTGTTACTCCAACGCACACTCAAGGCTAGTGGTGCTGCTGGAATGGCTCCACAACGTCGTCGATCTTCATCAGCAACCTTGTTTGGGAGGATGACTCAAAGTTTCCGTGGAACTCCAGCTGGAGTAAATCTTTCCCTGGTTAATGGTAGCACAAGCAGAGGAGTAGATACATTACGACAAGTTGAAGCCAAGTACCCTGCTCTGCTTTTCAAACAGCAGCTTACAGCATATGTGGAAAAGATATATGGAATGATTCGTGATAATTTGAAGAAAGAAATTTCGCCCTTGCTCGGATTATGCATCCAGGCACCAAGAACATCCAGAGCAAGCCTTGTTAAGGGATCATCACGTTCTGTTGCAAACACTGAAGCCCAGCGTGCTTTGATTGCTCACTGGCAGGGGATAGTGAAGAGCCTAGGAAACTTTCTAAATACTTTGAAAGCTAATCATGTTCCTCCCTTTTTAGTTCGTAAGGTGTTCACGCAAATTTTTTCTTTCATCAATGTACAATTATTCAACAGTCTGCTTTTAAGACGGGAGTGCTGCTCATTTAGCAATGGAGAATATGTCAAGGCTGGTTTGGCTGAATTGGAGCATTGGTGTTATAAGGCCACGGATGAGTATGCAGGTTCTGCCTGGGATGAGCTCAAACATATTAGACAAGCTATTGGATTTCTGGTCATTCATCAGAAACCAAAGAAAACATTGGATGAAATAAGCCATGACCTGTGCCCAGTCCTTAGTATACAGCAGCTATATCGAATAAGCACTATGTACTGGGATGACAAATATGGAACGCATAGTGTGTCCTCTGATGTCATATCCAACATGAGAGTGTTGATGACTGAAGATTCAAATAATGCAGTTAGTAATTCTTTCCTGTTAGATGATGATTCAAGCATTCCGTTTTCTGTTGACGACATATCGAAATCAATGGAACAGATAGATATTGCAGATATAGAGCCCCCGCCACTAATTCGTGAAAACTCTGGCTTTAGCTTTTTGTTGCCGCGCCCAGATTGA 4434 0.41 MEAPPGGVDDMTKLSYLHEPGVLQNLKARYELNEIYTYTGNILIAINPFQRLPHIYGAHMMQQYKGAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMQYLAFLGGRAGTEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPQEEIEKYKLGNPRSFHYLNQSKCYELADISDAREYLATRRAMDIVGISQKDQEAIFRVVASILHIGNIEFTKGKEVDSSVPKDDKAKFHLQTTADLLMCDVDALEDALCKRVMITPEEVIKRSLDPQSAAVSRDGLAKTIYSRLFDWLVDKINNSIGQDPKSKSLIGVLDIYGFESFKANSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKNHKRFIKPKLSRTDFTIAHYAGEVLYQSDQFLDKNKDYVVPEHQDLLSASKCSFVSGLFPPLPEESSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNRLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFGLLAPEAMEPNIDEKTGCQKILEKMGLKGYQIGKTKVFLRAGQMAELDAQRAQVLSNAAKVIQRRVRTHQARRHYLALRKKTIYVQSRWRGRLACKLYEHLRREAAAKKIQKNIRRYEARKAYKELHVSVLTLQRAIRATAARKQFRFRKQTKASIIIQARWRCHKAALYHKRLKKGAIVTQCRWRGRVARRELRKLKMAAKETGALQEAKDKLEKRVEELTWRLQLEKGLKTNLEESKAQEIAKLQNSLQEMQSKFEETNALLIKERETVKKVVEEAPPVIKETQVIVEDTQKIETLTAENETLKTSLESEKQKADDFERKYNEAQACSEERGKKLEDTEKKGRQLQESLTRLEEKITNLESENQVLRQQAVSMAPNKFLSGRSRSIIQRTESGHIVPEAKTPVSNQEMHSASMHRREPSDGLDDKPQKSLNEKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGTPAGVNLSLVNGSTSRGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSSDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDIADIEPPPLIRENSGFSFLLPRPD* 1478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01421 1477 Pfam Myosin head (motor domain) 8 664 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g01421 1477 SMART iq_5 749 771 IPR000048 GO:0005515
Lapu7g01421 1477 SMART iq_5 797 819 IPR000048 GO:0005515
Lapu7g01421 1477 SMART iq_5 701 723 IPR000048 GO:0005515
Lapu7g01421 1477 SMART iq_5 678 700 IPR000048 GO:0005515
Lapu7g01421 1477 SMART iq_5 774 796 IPR000048 GO:0005515
Lapu7g01421 1477 SMART iq_5 726 748 IPR000048 GO:0005515
Lapu7g01421 1477 MobiDBLite consensus disorder prediction 1015 1059 - -
Lapu7g01421 1477 Coils Coil 961 995 - -
Lapu7g01421 1477 CDD MYSc_Myo11 20 664 IPR036018 -
Lapu7g01421 1477 ProSiteProfiles IQ motif profile. 798 827 IPR000048 GO:0005515
Lapu7g01421 1477 PANTHER MYOSIN 5 1408 - -
Lapu7g01421 1477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 729 IPR027417 -
Lapu7g01421 1477 PRINTS Myosin heavy chain signature 36 55 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g01421 1477 PRINTS Myosin heavy chain signature 373 401 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g01421 1477 PRINTS Myosin heavy chain signature 426 454 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g01421 1477 PRINTS Myosin heavy chain signature 140 167 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g01421 1477 PRINTS Myosin heavy chain signature 93 118 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g01421 1477 MobiDBLite consensus disorder prediction 949 968 - -
Lapu7g01421 1477 FunFam Class V myosin 383 523 - -
Lapu7g01421 1477 ProSiteProfiles IQ motif profile. 702 731 IPR000048 GO:0005515
Lapu7g01421 1477 Gene3D - 383 567 - -
Lapu7g01421 1477 FunFam Myosin 2 256 371 - -
Lapu7g01421 1477 ProSiteProfiles IQ motif profile. 750 779 IPR000048 GO:0005515
Lapu7g01421 1477 FunFam unconventional myosin-Va 681 729 - -
Lapu7g01421 1477 CDD MyosinXI_CBD 1058 1443 IPR037975 GO:0007015
Lapu7g01421 1477 Gene3D - 729 776 - -
Lapu7g01421 1477 Gene3D - 678 728 - -
Lapu7g01421 1477 Gene3D - 777 826 - -
Lapu7g01421 1477 Coils Coil 919 953 - -
Lapu7g01421 1477 Coils Coil 856 887 - -
Lapu7g01421 1477 Coils Coil 821 848 - -
Lapu7g01421 1477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 729 827 IPR027417 -
Lapu7g01421 1477 MobiDBLite consensus disorder prediction 1036 1058 - -
Lapu7g01421 1477 Gene3D Myosin VI head, motor domain, U50 subdomain 256 545 - -
Lapu7g01421 1477 ProSiteProfiles IQ motif profile. 679 706 IPR000048 GO:0005515
Lapu7g01421 1477 Gene3D - 611 674 - -
Lapu7g01421 1477 FunFam unconventional myosin-Va 777 825 - -
Lapu7g01421 1477 Gene3D Kinesin motor domain 9 606 IPR036961 -
Lapu7g01421 1477 ProSiteProfiles IQ motif profile. 727 756 IPR000048 GO:0005515
Lapu7g01421 1477 Gene3D - 196 254 - -
Lapu7g01421 1477 ProSiteProfiles Myosin motor domain profile. 6 676 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g01421 1477 ProSiteProfiles Dilute domain profile. 1107 1420 IPR002710 -
Lapu7g01421 1477 SMART DIL_2 1295 1402 IPR002710 -
Lapu7g01421 1477 Pfam IQ calmodulin-binding motif 800 819 IPR000048 GO:0005515
Lapu7g01421 1477 Pfam IQ calmodulin-binding motif 681 699 IPR000048 GO:0005515
Lapu7g01421 1477 Pfam IQ calmodulin-binding motif 729 748 IPR000048 GO:0005515
Lapu7g01421 1477 Pfam IQ calmodulin-binding motif 776 791 IPR000048 GO:0005515
Lapu7g01421 1477 SMART MYSc_2a 1 677 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g01421 1477 FunFam Myosin heavy chain 196 251 - -
Lapu7g01421 1477 Pfam DIL domain 1296 1399 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01421 Lapu-Chr7 29608449 29623938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01421 1 1477 Myosins gene family AT1G54560 83.829 0.0 2597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01421 K10357 - gmx:100816792 2788.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01421 7 29608449 29623938 Lapu7g01421 7 29608449 29623938 ECH
Lapu6g02027 6 20034979 20050723 Lapu7g01421 7 29608449 29623938 PCT