Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01413 ATGCACACCCGTGCGAGTCTATTGTTGTTGTTTTGTTTCCCCGTTTTGTTAAGCGCCGCACCCTCCTCCGGCAATGGTGGCGGCGATTCCTTCATGTTGGGGTGTGGGTTAGGTGAAGGTGGTGGCAAAGACAATGACGGAAGACAATGGAGCCCCGACGAGAAGTACCTCTCAGGGGGCAATTCCCTGACTTTCAAAGCCTCTTTCCAAGACCCTTCGCTTTTGTCCGAGGTTCCATACATGACGTCACGAATTTTCACGTCCGAAGCAACCTACAAGTTCCCCGTACAAGCCGACAAACGCTACTGGCTCAGGCTCCATTTCTACCCCTCCGTTTACAACACCTTCGACCCCGTTGACTCTTATTTCTCCGTCACTGCAAACGGCCTCAAGCTTCTTTCCAACTTCAGCGCCTCCATCACGTGCCAAGCCCTCTCACAGGCCTACCTCGACCGAGAGTATTCCCTTGCGCCTTTGGATTCCGACACTCTCAGCGTCACCTTCACGCCCTCTGACAAACACAATGGAGCTTTTGCTTTCGTTAATGGGATTCAGCTCATCGCAATGCCCGAGTTGTTTGACGAGGCTCCCTTGGTGGGTTACGATGACCAAACCATGGATACCAAGACTTTGCATTTTCAGACCATGTTCAGGTTAAACGTTGGAGGACAATACATATCTCCAAATGAAGACTCTGGTCTAACCAGAATGTGGTACGATGATACACCTTATATTTATGGTTCTGGCACTGGTGTCACCAACCAAGCTACCAAGGAAGAAAAAATCGACTACAAAACCTTGCCACAGTCCATTGCTCCTCTCAATGTCTACTCCACTTCCCGATCCATGGGACCCGATAAGAATCTCAACATGGGCTACAATCTCACGTGGATATTCCAAGTTGATCCAGGTTCTATGTATCTTACCCGGTTGCATTTCTGCGAATATCACAATTCCAGATTGAATCAGATTGTTTTCAAAGTGTACATCAACAACCACACGGCGGAAACTTCTGCTGATGTGCTTGGGTGGTCTGGTGGTAAAGGAGTGCCAACTTACAAGGATTATGTAATATATGTTAAAGATCAGCCAGGTGATGATCAACTCTGGCTTGCTTTGCACCCTGCACCTGAAGCAAAGCCAGAATTTTATGATGCGTTACTCAATGGGGTGGAGGTGTTTAAGCTCAATGACACAGACTTGTCTGGCCCCAATCCTCAACCTTCTGACATGCTGGTTCAACATGAGCAGAAGGAAAATACTTTCCAAAGCAAACATGGGACTAGTAGGACTTTTGTTATTGGCAGTGCAGCTGGGGGTGCTGCAGGTTTTGCCTTGGTGGCGGCAATAATTGTTGTTGTTCATCACCACAAGAGAAACAGAGCTCCAGGGTCATACACCACCTCGTCTAGCTGGCTACCTCTTTATGGCAATTCGAACACAGGCACCAAATCCTCAGGATCAGGGAAGAGTGTAGGCAATTCCAACCTATCAGCAATGGCTCAAGGACTGTGCCGCTATTTCTCCTTACAAGATATGAAGCAAGCAACCAAGAATTTTGACGAGTCTAATGTGATAGGGGTGGGAGGGTTTGGAAAGGTTTATAAGGGTGTTATTGATAATGGGTTCAAAGTGGCAATCAAAAAATCGAACCCGCAATCAGAACAAGGAGTGAACGAGTTCCAGACAGAGATTGAGATGTTGTCCAAGTTGAGACACAAGCATTTGGTGTCCTTGATTGGTTTTTGCGAGGAGGATGGTGAGATGTGTCTGGTTTATGACTACATGGCTCGTGGCACCATGAGGGAACACCTTTACAAGGGAAGCAAGCCATTGGACATGCTAACATGGAAGCAAAGGTTGGAGATCTGCATAGGAGCCGCAAGAGGTCTTCACTACCTTCACACGGGAGCAAAATACACCATCATTCATAGAGATGTCAAAACAACCAACATTCTCCTTGATGAAAATTGGGTTGCCAAGGTTTCAGATTTTGGACTGTCCAAAACAGGTCCAAACATGAATCAAGGTCATGTTAGTACTGTGGTGAAGGGTAGCTTTGGATACTTGGATCCCGAATATTTCAGGAGGCAACAGTTGACTGAGAAGTCTGATGTGTACTCGTTTGGGGTTGTGCTGTTTGAGGCCCTTTGTGCAAGGCCTGCTCTCAATCCTAACCTTCCGAAGGAACAGGTAAGCCTTGCCGAATGGGCATTGTACAACAAAAGAAGAGGAACACTTGAGGACATCATTGACCCCAATCTCAAAGGAAAGGTCAACCCTGAAAGCTTGACCAAGTTTGCTGATGCAGCGGAGAAGTGTGTATCTGATCTTGGATTCGAACGACCCTCCATGAATGACCTCTTGTGGAATCTCGAATTCGCTCTCAACTTGGAACAGAACCCCGATGGTTCAACTGCTCCACGTCAGGACGAAAGTGAGTTCTCAGAAGTAAGCTTGGAACACAATAACATGGCAGCACATTACAAAAACCTTAGCCTTGAAAGTGAAAAAGGGCTTAGCCAAGACTCCAGTAATGATAACGCTGCTGTCATCTTCTCGCAAATTGGCAATCCAACAGGACGATGA 2589 0.4697 MHTRASLLLLFCFPVLLSAAPSSGNGGGDSFMLGCGLGEGGGKDNDGRQWSPDEKYLSGGNSLTFKASFQDPSLLSEVPYMTSRIFTSEATYKFPVQADKRYWLRLHFYPSVYNTFDPVDSYFSVTANGLKLLSNFSASITCQALSQAYLDREYSLAPLDSDTLSVTFTPSDKHNGAFAFVNGIQLIAMPELFDEAPLVGYDDQTMDTKTLHFQTMFRLNVGGQYISPNEDSGLTRMWYDDTPYIYGSGTGVTNQATKEEKIDYKTLPQSIAPLNVYSTSRSMGPDKNLNMGYNLTWIFQVDPGSMYLTRLHFCEYHNSRLNQIVFKVYINNHTAETSADVLGWSGGKGVPTYKDYVIYVKDQPGDDQLWLALHPAPEAKPEFYDALLNGVEVFKLNDTDLSGPNPQPSDMLVQHEQKENTFQSKHGTSRTFVIGSAAGGAAGFALVAAIIVVVHHHKRNRAPGSYTTSSSWLPLYGNSNTGTKSSGSGKSVGNSNLSAMAQGLCRYFSLQDMKQATKNFDESNVIGVGGFGKVYKGVIDNGFKVAIKKSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDGEMCLVYDYMARGTMREHLYKGSKPLDMLTWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNQGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPNLPKEQVSLAEWALYNKRRGTLEDIIDPNLKGKVNPESLTKFADAAEKCVSDLGFERPSMNDLLWNLEFALNLEQNPDGSTAPRQDESEFSEVSLEHNNMAAHYKNLSLESEKGLSQDSSNDNAAVIFSQIGNPTGR* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01413 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Lapu7g01413 862 Gene3D Phosphorylase Kinase; domain 1 481 595 - -
Lapu7g01413 862 ProSiteProfiles Protein kinase domain profile. 520 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01413 862 Gene3D Transferase(Phosphotransferase) domain 1 596 814 - -
Lapu7g01413 862 FunFam FERONIA receptor-like kinase 30 190 - -
Lapu7g01413 862 ProSitePatterns Protein kinases ATP-binding region signature. 526 549 IPR017441 GO:0005524
Lapu7g01413 862 SMART serkin_6 520 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01413 862 PANTHER OS07G0166700 PROTEIN 504 799 IPR045272 GO:0004714|GO:0006468
Lapu7g01413 862 FunFam FERONIA receptor-like kinase 211 397 - -
Lapu7g01413 862 Gene3D - 32 189 - -
Lapu7g01413 862 Gene3D - 211 397 - -
Lapu7g01413 862 FunFam Receptor-like protein kinase FERONIA 596 812 - -
Lapu7g01413 862 Pfam Protein tyrosine and serine/threonine kinase 524 727 IPR001245 GO:0004672|GO:0006468
Lapu7g01413 862 Pfam Malectin-like domain 34 395 IPR024788 -
Lapu7g01413 862 SUPERFAMILY Protein kinase-like (PK-like) 494 795 IPR011009 -
Lapu7g01413 862 CDD STKc_IRAK 526 793 - -
Lapu7g01413 862 FunFam receptor-like protein kinase FERONIA 483 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01413 Lapu-Chr7 29537686 29540274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01413 16 862 Receptor kinase-like Gene Family AT3G51550 52.316 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu7g01413 Malectin_like 3.8e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01413 - - gmx:100791236 1425.61