Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01403 ATGGATAGGGTGTTCTCAGTCGACGAAATCTCCGATCACTTCTGGCCATCCCCGCCGATCCCCGTCTCCGCCGCAGATGAGGCCTCCAAGATGAGCCGCAGCCCTTCCGAGTGGGCCTTCCAACGCTTCCTCCAGGAAGCTTCCACACCCTCTCCCCTCTCTCCTTCCTCCGCCACCGCCGCAGCCGCCGCTCCTGCCGCCGCGTCCGACGCCGTCTTTGTCGAGATCGATGATCATCCCAAACCTGCTCCTGCACCTTCCCAGAACGCCGCCGTTTTGTCCAATGCCCCTGTTCCCGTACCCCTTGACTCCGATGAGTACCAGGCCTTCCTCAAGAGCAAGCTCAACCTTGCATGCGCAGCTGTGGCCATGACTAGGGCGTCTTTGGGTAAATCTCAAGAGCCACCCCATTTTTCTGATGGTGGATCACAGCCTATTGATCCTTCTCAAGTTGGATCACAGACTACTTCTAAAGGATCTATTCCTTCTGGAAATGATCCGTCTAAGTTACAAGATAAAGATACAAAAGTACCGGTTGGGATGCCTTCCATACCTTCCATGCAAAAGAAACCTGTTGTTGCAGTTAGGCCATCAACAAGTGGATCATCAAGAGAACAGTCAGATGATGAGGATGCTGAGGGAGAGACATCTATGAATGACATGGACCCTGCTGATGCAAAAAGAGTAAGGAGGATGCTATCCAATAGGGAGTCTGCCCGGCGCTCTAGAAGAAGAAAGCAGGCTCATTTAACTGACCTAGAAACACAGGTTTCTCAATTAAGAGGTGAAAATTCTACCTTATTGAAGCGCCTTACTGATGTAAGTCAGAAATACAGTGACTCTGCTGTTGACAACAGAGTTTTAAAAGCTGATGTTGAAACATTAAGAGCAAAGGTGAAGATGGCTGAAGAGACTGTCAAAAGAATTACTGGGTTGAACCCAATGGTTCATGCCATGTCTGACATGTCATCATTGGGCATGCCATTATTTGATGGAAGAAGCCCTTCAGACACTTCAGCTGATGCAGCTGTTCCTGTGCACGATGATCATCATCACTTCTATCAACCCACATCTAATAATCCTATTCCCAGTCATGATCCGATAGTCAACGATGGGTTGGGGGGCATACCGTCAATTGAAAATGTGCAGCAGAACTCTGCAGCAGTGGTAGGTGGGAACAAAATGGGTCAAACTGCTTCCCTGCAGCGGGTAGCTAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGGTGTGGATTCCTGTGGACCTCCCTCTAATGGGGAGCAGTAA 1290 0.4977 MDRVFSVDEISDHFWPSPPIPVSAADEASKMSRSPSEWAFQRFLQEASTPSPLSPSSATAAAAAPAAASDAVFVEIDDHPKPAPAPSQNAAVLSNAPVPVPLDSDEYQAFLKSKLNLACAAVAMTRASLGKSQEPPHFSDGGSQPIDPSQVGSQTTSKGSIPSGNDPSKLQDKDTKVPVGMPSIPSMQKKPVVAVRPSTSGSSREQSDDEDAEGETSMNDMDPADAKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSDSAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMVHAMSDMSSLGMPLFDGRSPSDTSADAAVPVHDDHHHFYQPTSNNPIPSHDPIVNDGLGGIPSIENVQQNSAAVVGGNKMGQTASLQRVASLEHLQKRIRGGVDSCGPPSNGEQ* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01403 429 Pfam bZIP transcription factor 226 278 IPR004827 GO:0003700|GO:0006355
Lapu7g01403 429 SMART brlzneu 223 287 IPR004827 GO:0003700|GO:0006355
Lapu7g01403 429 Gene3D - 226 281 - -
Lapu7g01403 429 SUPERFAMILY Leucine zipper domain 227 277 IPR046347 GO:0003700|GO:0006355
Lapu7g01403 429 MobiDBLite consensus disorder prediction 137 168 - -
Lapu7g01403 429 Coils Coil 243 270 - -
Lapu7g01403 429 Pfam Basic leucine-zipper C terminal 294 418 IPR020983 -
Lapu7g01403 429 MobiDBLite consensus disorder prediction 1 33 - -
Lapu7g01403 429 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 225 277 IPR004827 GO:0003700|GO:0006355
Lapu7g01403 429 FunFam BZIP transcription factor 225 276 - -
Lapu7g01403 429 Coils Coil 285 305 - -
Lapu7g01403 429 CDD bZIP_plant_GBF1 228 279 IPR045314 GO:0003700|GO:0006355
Lapu7g01403 429 MobiDBLite consensus disorder prediction 130 227 - -
Lapu7g01403 429 PANTHER BASIC LEUCINE ZIPPER 63 1 419 - -
Lapu7g01403 429 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 230 245 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01403 Lapu-Chr7 29467426 29478122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01403 1 316 bZIP Transcription Factor Family AT4G02640 40.059 2.79e-50 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu7g01403 bZIP_C 1.2e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01403 K25784 - gmx:100170702 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01403 7 29467426 29478122 Lapu7g01403 7 29467426 29478122 ECH
Lapu6g02049 6 20258890 20263681 Lapu7g01403 7 29467426 29478122 PCT