Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01396 ATGTTCGATGGAGTACCAGACCAGTTCCACCAATTCATAACTCCACGGACCTCACTACCTCTTCACTTACCTTTCCCTCTCCATGCTTCTGGCACCCCCAATACCACCTTCCCTTCCAATTTTGATCCCTATAACCCTTCCCATCATTTGCCACTCCAACCCAACAACAATCTCTTGCACCCGTTACACCACCAACCATCTACCCACAAACATGAAGACAAGCAAGAAAACACCGCTATCCCAATGAACTTCGAAATCCAAAGAGATCAAAGGCAACAACTACCCCAGCTGATTGATCCCTGGACTAACGACGAAGTGCTCGCGCTGTTGAGGATCAGATCTAGCATGGAGAGTTGGTTCCCAGAACTCACTTGGGAACATGTCTCAAGGAAGCTGGCAGAGCTTGGATATAAGAGGAGTGCAGAGAAGTGCAAGGAGAAGTTTGAAGAAGAAAGTAGATATTTCAACAATAACATTAATTACGGCAAGAATAATAACAATTATCGGTTTCTTAGTGAGCTTGAGCAGCTTTACCATCAAGGGAGTGGTGATCATCTTGGGACCGAAGAAAAAACTCAGCAACTACAGAAACAAGACAAGATGGACCACCAACCATTGGAAGAAGGGGACTCTAGAAAAGTTGAGGCTTCCGAGAGAAAACAAAACCAGGATGCAGTAGTGGAAAAGACTCAAGGGCGCAAGAGAAGGAGGCCCGGTAGGTTTGAAATGTTCAAGGGTTTTTGTGAGAGCATTGTGCACAAGATGATGGCCCAGCAAGAAGAGATGCACAACAAGCTCCTCCAGGACATGATGAAGAGAGATGAAGAGAAGTTCACTCGAGAGGAAGCTTGGAAGAAGCAAGAGATGGAGAAAATGAACAAGGAGCTTGAGATTATGGCTCGTGAGCAAGCCATTGCAGGTGATAGACAAACGAACATTATTCAAATACTGAACAAGTTCTCAGTGACTTCTGCTTCAAACAAGAGCCACAAGGTTGCAACTAATGGTTCAAACCTAAAAACTCACATTACGCAAAACCCTAATCCTTCGCAAGACATCGCAGCTATGCCCACAACAGAAAACCCTACCTCAAGTCTTTCACAAGACACATTACAAGTGATTATAAATCCTTCAACTTCTTCCACTTCAGCTCAAGTTCCTCAACCCAACCCTAGTTGTTGCTCTCTAAATAGCCAGAATAATATAAATCCAGTAGAAAGAAATTCGGTTTTGAATAAAAGTTTGTCAACAAACATTGTTGAGAAAGACGATGTTGGGAGAAGGTGGCCAAAGGACGAAGTGTTAGCACTGATAAACCTGAGGTGCACTAGTGTGAGCAACAACAACACCAATGAGGAGAAGGAAGGGAACAAGGTGCCTCTGTGGGAGAAAATCTCACAGGGGATGTCGGAGTTGGGATACAGGAGGAGTTCAAAGAGGTGCAAAGAGAAGTGGGAAAACATAAACAAGTACTTCAGGAAAACCAAGGATGTTAATAAGAAGAGGTCCCTTGACTCAAGGACCTGTCCCTACTTTCATCAATTGAGCAGTCTATATAATGAAGGAAAACTTGTTCTACAATCCGAAAGGCCAGAAAGCCGCACGAATAATCCACCTGATAATCCCGAGCAAGTGCAACCAGATCAAACACACCTCGAGTCTTCTTCTCAAGTGGGGTCTGGTGGTTTCAGTGTGAAGCAGCAGGTTGATCATGGAGGTGAGAAAACCTTGATGGAAGTACCTTCTTTGGATTTTGATCAGTTTTAA 1767 0.4403 MFDGVPDQFHQFITPRTSLPLHLPFPLHASGTPNTTFPSNFDPYNPSHHLPLQPNNNLLHPLHHQPSTHKHEDKQENTAIPMNFEIQRDQRQQLPQLIDPWTNDEVLALLRIRSSMESWFPELTWEHVSRKLAELGYKRSAEKCKEKFEEESRYFNNNINYGKNNNNYRFLSELEQLYHQGSGDHLGTEEKTQQLQKQDKMDHQPLEEGDSRKVEASERKQNQDAVVEKTQGRKRRRPGRFEMFKGFCESIVHKMMAQQEEMHNKLLQDMMKRDEEKFTREEAWKKQEMEKMNKELEIMAREQAIAGDRQTNIIQILNKFSVTSASNKSHKVATNGSNLKTHITQNPNPSQDIAAMPTTENPTSSLSQDTLQVIINPSTSSTSAQVPQPNPSCCSLNSQNNINPVERNSVLNKSLSTNIVEKDDVGRRWPKDEVLALINLRCTSVSNNNTNEEKEGNKVPLWEKISQGMSELGYRRSSKRCKEKWENINKYFRKTKDVNKKRSLDSRTCPYFHQLSSLYNEGKLVLQSERPESRTNNPPDNPEQVQPDQTHLESSSQVGSGGFSVKQQVDHGGEKTLMEVPSLDFDQF* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01396 588 PANTHER FI21293P1 67 572 - -
Lapu7g01396 588 MobiDBLite consensus disorder prediction 182 238 - -
Lapu7g01396 588 ProSiteProfiles Myb-like domain profile. 100 152 IPR001005 -
Lapu7g01396 588 FunFam Trihelix transcription factor GT-2 101 157 - -
Lapu7g01396 588 MobiDBLite consensus disorder prediction 527 588 - -
Lapu7g01396 588 CDD GT1 427 496 - -
Lapu7g01396 588 ProSiteProfiles Myb-like domain profile. 428 489 IPR001005 -
Lapu7g01396 588 MobiDBLite consensus disorder prediction 338 367 - -
Lapu7g01396 588 Pfam Myb/SANT-like DNA-binding domain 99 177 IPR044822 -
Lapu7g01396 588 Pfam Myb/SANT-like DNA-binding domain 427 517 IPR044822 -
Lapu7g01396 588 MobiDBLite consensus disorder prediction 184 238 - -
Lapu7g01396 588 Gene3D - 101 157 - -
Lapu7g01396 588 Gene3D - 429 494 - -
Lapu7g01396 588 MobiDBLite consensus disorder prediction 527 564 - -
Lapu7g01396 588 FunFam Trihelix transcription factor GTL2 429 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01396 Lapu-Chr7 29394387 29397225 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01396 1 521 Trihelix Transcription Factor Family AT5G28300 40.268 8.84e-101 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lapu7g01396 Myb_DNA-bind_4 7.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01396 - - gmx:100804367 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01396 7 29394387 29397225 Lapu7g01396 7 29394387 29397225 ECH