Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01395 ATGGCGGATTCTTCAAGCAACTCAAAAGATAAGAACAACACGCGCGTCTACCATCCCTACCAGGATCTCAACGTTCCAATCCAAAAGCTCTACAACCTCCCCACCGCGCCGGAGCACCTCTTCCCGGAAGAAGCAGCCAGAACCCACCGCTCCTGGGGCGACAACCTCCAGTACTATACCGGCACCGCCTACCTCTCCGGTGCAATAATCGGCGCTGCTAGAGGCACCTTCCAGGGCCTCCGCGAGGCCGAGTCCGGCGACTCCCTCAAAATCCGACTCAACCGAGTCCTCAACTCGGGCGGCCACGCGGGTCGCAAACTCGGCAACTCGCTCGGCATTCTTGGCCTCATCTTCGCCGGCCTCGAGAGTGGGATGATCCACGCCAGGGGCACCGATGACTTCGTCAACAGCGCCGTCGCCGGACTCGGAACCGGAGCTCTCTACAGAGCCGCTGCCGGGCCCCGATCCGCCGCCATCGCCGCCGCCATCGGAGGGATCGCCGCCGCCGCGGCGGTTGGCGGGAAGCAGGCTTTGAAGAGATACGTGCCGATTTAG 555 0.6306 MADSSSNSKDKNNTRVYHPYQDLNVPIQKLYNLPTAPEHLFPEEAARTHRSWGDNLQYYTGTAYLSGAIIGAARGTFQGLREAESGDSLKIRLNRVLNSGGHAGRKLGNSLGILGLIFAGLESGMIHARGTDDFVNSAVAGLGTGALYRAAAGPRSAAIAAAIGGIAAAAAVGGKQALKRYVPI* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01395 184 PANTHER TIM23 26 171 IPR045238 GO:0022857
Lapu7g01395 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01395 Lapu-Chr7 29387413 29387967 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01395 3 180 Chloroplast and Mitochondria Gene Families AT1G17530 56.111 1.32e-63 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01395 K17794 - gmx:100779163 293.123