LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu7g01389	ATGAATGGGGTCACACACCTTGAACCAGATGACTCTGAGTTTGTTGAAGTTGATCCAACTGGCAGATATGGCAGATACAATGAAATCCTTGGGAAAGGAGCTTCAAAGACAGTATATAGAGCATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAGGTCAAGCTGTATGATTTTCTGCAAAGTCCTGAAGATCTTGAGAGGCTTTACTGTGAAATTCATCTCCTGAAAACATTGAAGCACAGAAACATTATGAAATTCTATACTTCTTGGGTTGATACTGCGAATAGGAATATCAACTTCGTGACTGAAATGTTTACCTCCGGTACACTTCGACAGTATAGGCTAAAGCACAAGAGAGTTAACATCAGAGCGGTGAAGCATTGGTGTAGACAGATCTTGAGTGGACTTCTCTATCTTCATAGTCACGATCCGCCTGTGATCCATAGAGATCTAAAATGTGATAACATTTTTGTCAATGGAAACCAAGGGGAAGTGAAGATTGGGGATCTTGGTTTGGCAGCAATTCTCCGAAAATCTCATGCAGCTCACTGTGTAGGGACGCCCGAGTTCATGGCCCCTGAAGTATATGAAGAGGCATATAATGAACTAGTTGACATTTATTCCTTTGGGATGTGCATACTAGAGATGGTCACATTCGAATATCCTTATAGTGAATGTACTCATCCGGCTCAAATCTATAAGAAAGTTGTTTCTGGGAAAAAGCCAGATGCTTTGTATAGAGTGAAGGATCCGGAGGTGCGACAATTTGTTGAGAAATGCTTGGCCACGGTGTCTCTTAGGCTATCTGCAAGAGAGCTTCTAGATGATCCATTTCTTCGAATTGATGATTATGAATATGATATGAGAACTGTAGAAAATGGGGAATTGAATGAATTTGGTTCTCTCATCAGACAGCCATTCTTTGATCTTCATCGAAGCTACAGTAACTTCAGTAACGAATACTCAAATGGCTTTGGGTATGAAGGAGACTGGTGTCCTCATCCGGCTGAGATTGAACCAAGCGAAATTGAACTTTTTGAGTACCATGATGATGAAGCTTCTGAAGATGTTGACATAAGCATCAAGGGCAAGAGGAAAGATGATGGTGGCATCTTTTTGAGACTAAGAATTGCTGATAAAGAAGGTCGCATCCGAAATATTTATTTCCCATTTGACATAGAGATGGACACAGCAATAAGTGTGGCAACTGAAATGGTTGCAGAGCTCGACATTACTAATCAGGATGTTACCAGAATAGCTGATATGATTGATGGGGAAATTGCTTCCTTGGTACCTGAATGGAGACCGGGACCAGGAATTGACGAAACTCCCCGTTTTGCAAATCAAGGTTTCTGTCACAATTGTGTGTCTAATCATACTTCTAGCGGCTCTTTTATAGATTTTCTTTCACACAATCCAGGAGACAAGAACTTGAAACTTGAGTGTTGTAGCCATGGATGTGCTTCAATGCATGGGCGGTTTGAGGAGATTACCTTCCAATCTGAAGAGTATGACAACCATGCTAGAGGGGATCTGAACATATCAAGCCAATTAGACTGCTTGCAGTATCAGGAGTTATGGAATCAGCACGAAAGTCGTGAACTGAGTCCAGTAGAGTCTGATCAAAGCCATTCTGATGAACTATACGAACAATTAGATAAATCAATTCCAACTAAGGATAAAGAACATGATGGTTGGGAAAACAAGGTTTCACTCAATGCTGCAAATTCTCTAAGAACTTTATCAGGAAGTCATGACTTCTCTACCATGCGATCTGCCTATTGTGACCTTGAAGATGACTATGAGAAAGAGATCCAAAAGGAACTCAGATGGCTAAGAGCCAAGTACCAAATGGAATTAAGGGATCATAAGGACCGACAGTTTGAGCAATCTTCACACGGTACTAGCAAAGAGCACAAAACAGAAAAGGGCTTCTTGTTGTCACCTCTACTGACAGAAACAATAAAAGAAGGTAACAGTGGGACTCAGTTGAAATCCATTACTAATAAGTGGCATTGTGATTCCAGTAACCACCCTCATGTCCATGAAAGCAGCCCCAATTCGGACACCCAAAGGGTCCAAAATTGTGAGGCGACGGAATCCCCTGGCGAAGGTATGGTTACTGCAAAGAGTTTTTATACTGGTTCATTGCTTCCACACTCTCTGCACAGGACAGTTTCCCTCCCAGTTGATGCTGTTCATATATAA	2214	0.4142	MNGVTHLEPDDSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILSGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDALYRVKDPEVRQFVEKCLATVSLRLSARELLDDPFLRIDDYEYDMRTVENGELNEFGSLIRQPFFDLHRSYSNFSNEYSNGFGYEGDWCPHPAEIEPSEIELFEYHDDEASEDVDISIKGKRKDDGGIFLRLRIADKEGRIRNIYFPFDIEMDTAISVATEMVAELDITNQDVTRIADMIDGEIASLVPEWRPGPGIDETPRFANQGFCHNCVSNHTSSGSFIDFLSHNPGDKNLKLECCSHGCASMHGRFEEITFQSEEYDNHARGDLNISSQLDCLQYQELWNQHESRELSPVESDQSHSDELYEQLDKSIPTKDKEHDGWENKVSLNAANSLRTLSGSHDFSTMRSAYCDLEDDYEKEIQKELRWLRAKYQMELRDHKDRQFEQSSHGTSKEHKTEKGFLLSPLLTETIKEGNSGTQLKSITNKWHCDSSNHPHVHESSPNSDTQRVQNCEATESPGEGMVTAKSFYTGSLLPHSLHRTVSLPVDAVHI*	738

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lapu7g01389	737	Gene3D	-	371	436	-	-
Lapu7g01389	737	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	148	160	IPR008271	GO:0004672\|GO:0006468
Lapu7g01389	737	FunFam	probable serine/threonine-protein kinase WNK9	107	286	-	-
Lapu7g01389	737	Gene3D	Phosphorylase Kinase; domain 1	8	105	-	-
Lapu7g01389	737	Gene3D	Transferase(Phosphotransferase) domain 1	107	286	-	-
Lapu7g01389	737	CDD	STKc_WNK	22	281	-	-
Lapu7g01389	737	ProSiteProfiles	Protein kinase domain profile.	24	281	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Lapu7g01389	737	Pfam	Protein kinase domain	27	281	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Lapu7g01389	737	FunFam	Probable serine/threonine-protein kinase WNK1	9	105	-	-
Lapu7g01389	737	PANTHER	SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED	10	637	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu7g01389	Lapu-Chr7	29330789	29335674	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu7g01389	1	508	MAP Kinase Kinase Kinase	AT3G22420	58.258	0.0	604

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	WNK_NRBP	Lapu7g01389		Pkinase	2.3e-48	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu7g01389	K08867		-	gmx:100272198	1397.49

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