Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01389 ATGAATGGGGTCACACACCTTGAACCAGATGACTCTGAGTTTGTTGAAGTTGATCCAACTGGCAGATATGGCAGATACAATGAAATCCTTGGGAAAGGAGCTTCAAAGACAGTATATAGAGCATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAGGTCAAGCTGTATGATTTTCTGCAAAGTCCTGAAGATCTTGAGAGGCTTTACTGTGAAATTCATCTCCTGAAAACATTGAAGCACAGAAACATTATGAAATTCTATACTTCTTGGGTTGATACTGCGAATAGGAATATCAACTTCGTGACTGAAATGTTTACCTCCGGTACACTTCGACAGTATAGGCTAAAGCACAAGAGAGTTAACATCAGAGCGGTGAAGCATTGGTGTAGACAGATCTTGAGTGGACTTCTCTATCTTCATAGTCACGATCCGCCTGTGATCCATAGAGATCTAAAATGTGATAACATTTTTGTCAATGGAAACCAAGGGGAAGTGAAGATTGGGGATCTTGGTTTGGCAGCAATTCTCCGAAAATCTCATGCAGCTCACTGTGTAGGGACGCCCGAGTTCATGGCCCCTGAAGTATATGAAGAGGCATATAATGAACTAGTTGACATTTATTCCTTTGGGATGTGCATACTAGAGATGGTCACATTCGAATATCCTTATAGTGAATGTACTCATCCGGCTCAAATCTATAAGAAAGTTGTTTCTGGGAAAAAGCCAGATGCTTTGTATAGAGTGAAGGATCCGGAGGTGCGACAATTTGTTGAGAAATGCTTGGCCACGGTGTCTCTTAGGCTATCTGCAAGAGAGCTTCTAGATGATCCATTTCTTCGAATTGATGATTATGAATATGATATGAGAACTGTAGAAAATGGGGAATTGAATGAATTTGGTTCTCTCATCAGACAGCCATTCTTTGATCTTCATCGAAGCTACAGTAACTTCAGTAACGAATACTCAAATGGCTTTGGGTATGAAGGAGACTGGTGTCCTCATCCGGCTGAGATTGAACCAAGCGAAATTGAACTTTTTGAGTACCATGATGATGAAGCTTCTGAAGATGTTGACATAAGCATCAAGGGCAAGAGGAAAGATGATGGTGGCATCTTTTTGAGACTAAGAATTGCTGATAAAGAAGGTCGCATCCGAAATATTTATTTCCCATTTGACATAGAGATGGACACAGCAATAAGTGTGGCAACTGAAATGGTTGCAGAGCTCGACATTACTAATCAGGATGTTACCAGAATAGCTGATATGATTGATGGGGAAATTGCTTCCTTGGTACCTGAATGGAGACCGGGACCAGGAATTGACGAAACTCCCCGTTTTGCAAATCAAGGTTTCTGTCACAATTGTGTGTCTAATCATACTTCTAGCGGCTCTTTTATAGATTTTCTTTCACACAATCCAGGAGACAAGAACTTGAAACTTGAGTGTTGTAGCCATGGATGTGCTTCAATGCATGGGCGGTTTGAGGAGATTACCTTCCAATCTGAAGAGTATGACAACCATGCTAGAGGGGATCTGAACATATCAAGCCAATTAGACTGCTTGCAGTATCAGGAGTTATGGAATCAGCACGAAAGTCGTGAACTGAGTCCAGTAGAGTCTGATCAAAGCCATTCTGATGAACTATACGAACAATTAGATAAATCAATTCCAACTAAGGATAAAGAACATGATGGTTGGGAAAACAAGGTTTCACTCAATGCTGCAAATTCTCTAAGAACTTTATCAGGAAGTCATGACTTCTCTACCATGCGATCTGCCTATTGTGACCTTGAAGATGACTATGAGAAAGAGATCCAAAAGGAACTCAGATGGCTAAGAGCCAAGTACCAAATGGAATTAAGGGATCATAAGGACCGACAGTTTGAGCAATCTTCACACGGTACTAGCAAAGAGCACAAAACAGAAAAGGGCTTCTTGTTGTCACCTCTACTGACAGAAACAATAAAAGAAGGTAACAGTGGGACTCAGTTGAAATCCATTACTAATAAGTGGCATTGTGATTCCAGTAACCACCCTCATGTCCATGAAAGCAGCCCCAATTCGGACACCCAAAGGGTCCAAAATTGTGAGGCGACGGAATCCCCTGGCGAAGGTATGGTTACTGCAAAGAGTTTTTATACTGGTTCATTGCTTCCACACTCTCTGCACAGGACAGTTTCCCTCCCAGTTGATGCTGTTCATATATAA 2214 0.4142 MNGVTHLEPDDSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILSGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDALYRVKDPEVRQFVEKCLATVSLRLSARELLDDPFLRIDDYEYDMRTVENGELNEFGSLIRQPFFDLHRSYSNFSNEYSNGFGYEGDWCPHPAEIEPSEIELFEYHDDEASEDVDISIKGKRKDDGGIFLRLRIADKEGRIRNIYFPFDIEMDTAISVATEMVAELDITNQDVTRIADMIDGEIASLVPEWRPGPGIDETPRFANQGFCHNCVSNHTSSGSFIDFLSHNPGDKNLKLECCSHGCASMHGRFEEITFQSEEYDNHARGDLNISSQLDCLQYQELWNQHESRELSPVESDQSHSDELYEQLDKSIPTKDKEHDGWENKVSLNAANSLRTLSGSHDFSTMRSAYCDLEDDYEKEIQKELRWLRAKYQMELRDHKDRQFEQSSHGTSKEHKTEKGFLLSPLLTETIKEGNSGTQLKSITNKWHCDSSNHPHVHESSPNSDTQRVQNCEATESPGEGMVTAKSFYTGSLLPHSLHRTVSLPVDAVHI* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01389 737 Gene3D - 371 436 - -
Lapu7g01389 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Lapu7g01389 737 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Lapu7g01389 737 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Lapu7g01389 737 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Lapu7g01389 737 CDD STKc_WNK 22 281 - -
Lapu7g01389 737 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01389 737 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01389 737 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Lapu7g01389 737 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 637 - -
Lapu7g01389 737 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 374 428 IPR024678 GO:0004674|GO:0005524
Lapu7g01389 737 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01389 737 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01389 Lapu-Chr7 29330789 29335674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01389 1 508 MAP Kinase Kinase Kinase AT3G22420 58.258 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lapu7g01389 Pkinase 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01389 K08867 - gmx:100272198 1397.49