Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01384 ATGCTTTCTCCGTTGGTTTCTTGGTTCTTGTCCCCCTCCTCTTCCTCCTCCTCTTCCGAAGAAGAAGAAGAAAACCTTGACATTAACACTGATGATCACCCTAAGCATGAAAACCACCAAAACTTCAATCTTCAAGATGACGAGAACGATCAATACCTTAGCTCATGGGATGTGGATGATAACATTCCAATTGCTCTTGCCGTTCCCAGTGCCTCCCCTGCCGTGACGGTGGCCTTCCCGGCCGACGATGAAAGAAGCACCATCCCCGGCACCACCACAACCACATTAGTAACACGCTCCAAAGGGCAGTGCTCCACCAAGTATTCGGGCATGGTGAGACAATATCAGAGGCTGTGGACGAAGCAGGACGAGAAGGAGCTGCTGAAGGGATACCTTGATTACATCAAGCAGCATGGGAAGACAACCACCACCCTCCAAAACGACGTAGCCTCGTTGTATGATCACGTGAGGCCCAAACTGAACGTCGATTTCAACAGGAATCAGCTTGTTGAGAAGTTGCGTAGGCTAAAGAGGAAACACAAGTTGACTTTGGACAAAGGGAAGGACAAGGAGGTTCCTTTTAGGAACCCACAGGAACAGGCCATTTTCGAAATTTCACACAAGATTTGGGGCAATGACACGGATAACCTATTAGACCAAGATTCGTGGGATGGTGACGCTTCAGGACGCACTCCTGAAAGTCGTTACCTTGTTGGCAACGTTAAGGTGAAGATTGATCAACTTGACAACAGTGATGAAATAGACGAGAGAGTGCCAAAGCGGATGCGGTTAGATGATGCAGAAGATGTGAACAGAACAACTGAGCAGAACAATGGTGGTAGCATACAGGGCTTCATTGAGGAGACCATGAGGTCCTGTTTCTCCCCATTGCTGAAGGAAGTGTTGGATGAAGCACAGGAAGAGCCACCTCCTGGGTCGGTGCCAATCCCATTGCCGCTATGTCCTGAGGAAGTGGACCATGAGCAATGGAGAAAACGGGGGATTTTAGAGCTGGAGGTGTATTTGAAGCGGTTGGAGTTGTTGCAGGATCAGATCAAGGCTAGATTGGAGGAGTTGCGATCTAGATGA 1089 0.4885 MLSPLVSWFLSPSSSSSSSEEEEENLDINTDDHPKHENHQNFNLQDDENDQYLSSWDVDDNIPIALAVPSASPAVTVAFPADDERSTIPGTTTTTLVTRSKGQCSTKYSGMVRQYQRLWTKQDEKELLKGYLDYIKQHGKTTTTLQNDVASLYDHVRPKLNVDFNRNQLVEKLRRLKRKHKLTLDKGKDKEVPFRNPQEQAIFEISHKIWGNDTDNLLDQDSWDGDASGRTPESRYLVGNVKVKIDQLDNSDEIDERVPKRMRLDDAEDVNRTTEQNNGGSIQGFIEETMRSCFSPLLKEVLDEAQEEPPPGSVPIPLPLCPEEVDHEQWRKRGILELEVYLKRLELLQDQIKARLEELRSR* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01384 362 MobiDBLite consensus disorder prediction 1 42 - -
Lapu7g01384 362 Coils Coil 166 186 - -
Lapu7g01384 362 Coils Coil 338 362 - -
Lapu7g01384 362 Pfam Protein of unknown function, DUF573 116 211 IPR007592 GO:0006355
Lapu7g01384 362 PANTHER BNAANNG10740D PROTEIN-RELATED 13 358 IPR007592 GO:0006355
Lapu7g01384 362 MobiDBLite consensus disorder prediction 28 42 - -
Lapu7g01384 362 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01384 Lapu-Chr7 29309105 29310193 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01384 62 361 GeBP Transcription Factor Family AT5G28040 32.143 2.10e-45 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lapu7g01384 DUF573 4e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01384 - - var:108344158 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02076 6 20459981 20461777 Lapu7g01384 7 29309105 29310193 PCT