Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01375 ATGAGTGAGAGAGTGAAGAAGGAAAAGCCAACGGAGAAAAGAGAGAGGATGAAGAACATCTTCAAGAAGCTTCACATAGGTGGTAACCATGATCCTCAGCGATCCAATGAGAATTCTCCACCTGTGCCGTCGCCGTCGTGCGCCGCCGATCAGTCTCAAAGCTCCGGCGCCACTCCGGCAAGTCCCTCGTCGGCCTCGGCGTCTGCCGCCGCGGTTACTCCCGGCGGCGGCGTGAGTCCGGTGGTGAATCGGCAGGACTTTTTCTCGTCGGAGGAGGAGTTTCAGGTGCAGCTAGCCCTAGCTATCAGTGCTTCCAATTCGGAGTTCCGCGACGATCCTGAGAAGGATCAGATCCACGCGGCGACGCTGTTGAGTTTAGGAGGTATTCGAATCGATTCGACGAGAAACAAGGACGACGCGGCGGAGGCGCTGTCGAGGCAGTACTGGGAATATAATGTGCTTGACTATGAGGAGAAAGTAGTAGATGGTTTTTATGATGTATATGGGCCCTATAATGATTCGGTAATGCAAGGGAAGATGCCATCTCGAACGGATCTTGAAGCAAACCCTGAAGGCTCTGAGGTGGTCATTGTTAATAGAACAATTGATCATGCTCTGGAAGAACTGATACAAATTGCACAATGTATTGCGATAGACTGCCCGGTCACTAGTTTGGCACAAAGGCTTGCTGAACTTGTTACAAGTCATATGGGTGGTCCTGTAAAGGATGCTAGTATTATGCTAGCAAGATGGACAGAAACAAGAGCAGAGCTAAGAACATCTCTTCACACAATTGTATTACCTCTTGGGTCCTTAAATATTGGGCTCTCTAGGCATCGCGCGTTGCTTTTCAAGGTATTAGCTGACAACATTAATATGCCCTGTAGACTGGTAAAAGGTAGTCATTACACTGGTGTGGAGGATGATGCTGTCAACATTATAAAGTTGGAGGGTGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCTCCAGGGACACTTATCCCACTTATGCCAGCTGATATTTTAAGCACCAAGGATAGTTCCTTTAACAAGGCTTTTAATCCCAAGATTTTGCCCAGTTTACCTTCCACCAAGGATACTGAACTTTCTTACTCAAGACCTATCCAACCATCTCATGGTGAAGGTAGTAGTCAAAATTCTGTGATAAAAGATAATTCACTGCCTTGGAATGGAAAATCATATTTTGAGAAGTCAGAGCCTTCAAACATAGGTTTGAGAAGAGACACTGGCGTTGGTCCTTCTAAAATTTCTAATAGAGTGACGACCCCTAACCAACTGGAGAATTTGCCAGCCTTGTCTGGTACTTCTCTGTACAAAGGGACCCTTGGAATGAATACAGTTGGTGATGGGACCAGACTTAATGTCAATGTCGTTCCATATACTCAAAACAGCCCCAATGACTCTCGAAACCTTTTTGCAGATCTTAACCCATTCCAAATAAAAGGAATGGGGAAGGCCTCTGTTCTTAACAAACCTGTGGAAAGTAAGCCTCCTGAGATTAAAAGTACTAAAAACAATACTGTTTCTGGTCGACCCCCAGTGCTACTGACAAAGAAGAATCGTCATGCGTACAATGAAGACCCCAGGAAAGCTAATCATAACCCTAATGAATACAACCCTCCCTTGTTTGTTTCCAATGGTTCTTCTACATCTGAAAATATTGACCTAAGTAGTTCCAAACCATTATATAATTCAAATTTAAATAATGATGTAAATGTTCAAACTTCGGCGCATGTTACTGGTTCAGTTTCACCATCTTTGGTACCCGGACTGAACCAGATTGAGGATCTCAATGCTGATTTTAACCACGGGGATCTGGAAAATTCTCAGAACTTCATGGTAGACGTGGTTAGAGAGCCTGAAAATGCAGAAATCAGACAATATGACCGGAGGAAGTATACTTACGACAGATTCATGGGAAGCAATTTCAAATTAAAAGAACCAGAGAGTACCAGCTCATCAATTGATTCCCTCACAAACAGGGTGGATCAAATATTGGATGATGTAGATGTTGGTGAATGTGAGATTCCATGGGAGGATCTGTTTCTTGGTGAAAGAATTGGTATAGGTTCATATGGCGAGGTATACCATGCCGACATGAATGGCACAGAGGTTGCTGTAAAGAAATTTTTAGATCAGGATTTTTCAGGCGCCGCATTGTCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGGTTACGCCATCCAAATATTGTTCTTTTTATGGGTGCTGTTACTCGTCCTCCTAATCTCTCAATCATTTCAGAGTATCTACCAAGAGGAAGCTTGTACAGATTACTTCATCGCCCTAATTGTCAGATTGATGAGAAACGAAGAATAAAAATGGCTTTGGACGTGGCAAGGGGCATGAATTGCTTACACACCAGCACACCTATAATTGTTCACCGAGATCTAAAGTCTCCAAATCTTTTGGTTGATAAGAACTGGAATGTTAAGGTATGCGATTTTGGGTTGTCAAGGTTGAAGCACAACACTTTTTTGTCATCCAAGTCAACTGCTGGAACGCCGGAGTGGATGGCTCCTGAAGTTCTCCGAAATGAACCCTCAAATGAAAAATGCGATGTTTATAGCTTTGGAGTCATCCTATGGGAGCTTGCCACTCTAAGGTTGCCGTGGACTGGAATGAATCCTATGCAAGTTGTTGGTGCTGTTGGTTTCCAAAATCGTAGACTTGAAATTCCTAAGGAAGTCGATCCTATAGTTGCAAGAATAATCTGGGAATGTTGGCAACAGGATCCAAATTTGCGGCCCTCATTTGCACAACTCACAGTGGCTCTAAAGCCTCTGCAGCGTCTGGTTCTACCATCTCATCAAGACCAGGTAGCTCCACTTGTGCCGCAGGAGATTTCTGTAAATTCCACCCCATGA 2910 0.4409 MSERVKKEKPTEKRERMKNIFKKLHIGGNHDPQRSNENSPPVPSPSCAADQSQSSGATPASPSSASASAAAVTPGGGVSPVVNRQDFFSSEEEFQVQLALAISASNSEFRDDPEKDQIHAATLLSLGGIRIDSTRNKDDAAEALSRQYWEYNVLDYEEKVVDGFYDVYGPYNDSVMQGKMPSRTDLEANPEGSEVVIVNRTIDHALEELIQIAQCIAIDCPVTSLAQRLAELVTSHMGGPVKDASIMLARWTETRAELRTSLHTIVLPLGSLNIGLSRHRALLFKVLADNINMPCRLVKGSHYTGVEDDAVNIIKLEGEREFLVDLMAAPGTLIPLMPADILSTKDSSFNKAFNPKILPSLPSTKDTELSYSRPIQPSHGEGSSQNSVIKDNSLPWNGKSYFEKSEPSNIGLRRDTGVGPSKISNRVTTPNQLENLPALSGTSLYKGTLGMNTVGDGTRLNVNVVPYTQNSPNDSRNLFADLNPFQIKGMGKASVLNKPVESKPPEIKSTKNNTVSGRPPVLLTKKNRHAYNEDPRKANHNPNEYNPPLFVSNGSSTSENIDLSSSKPLYNSNLNNDVNVQTSAHVTGSVSPSLVPGLNQIEDLNADFNHGDLENSQNFMVDVVREPENAEIRQYDRRKYTYDRFMGSNFKLKEPESTSSSIDSLTNRVDQILDDVDVGECEIPWEDLFLGERIGIGSYGEVYHADMNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNIVLFMGAVTRPPNLSIISEYLPRGSLYRLLHRPNCQIDEKRRIKMALDVARGMNCLHTSTPIIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWTGMNPMQVVGAVGFQNRRLEIPKEVDPIVARIIWECWQQDPNLRPSFAQLTVALKPLQRLVLPSHQDQVAPLVPQEISVNSTP* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01375 969 FunFam Serine/threonine-protein kinase isoform 1 679 766 - -
Lapu7g01375 969 MobiDBLite consensus disorder prediction 364 390 - -
Lapu7g01375 969 ProSitePatterns Protein kinases ATP-binding region signature. 694 716 IPR017441 GO:0005524
Lapu7g01375 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Lapu7g01375 969 SMART serkin_6 688 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01375 969 Gene3D Transferase(Phosphotransferase) domain 1 767 949 - -
Lapu7g01375 969 MobiDBLite consensus disorder prediction 496 527 - -
Lapu7g01375 969 SUPERFAMILY Protein kinase-like (PK-like) 678 957 IPR011009 -
Lapu7g01375 969 MobiDBLite consensus disorder prediction 31 70 - -
Lapu7g01375 969 MobiDBLite consensus disorder prediction 1 76 - -
Lapu7g01375 969 FunFam Serine/threonine-protein kinase CTR1 767 950 - -
Lapu7g01375 969 MobiDBLite consensus disorder prediction 407 428 - -
Lapu7g01375 969 Pfam Protein tyrosine and serine/threonine kinase 690 938 IPR001245 GO:0004672|GO:0006468
Lapu7g01375 969 Gene3D Phosphorylase Kinase; domain 1 681 765 - -
Lapu7g01375 969 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 69 946 - -
Lapu7g01375 969 Pfam Ethylene-responsive protein kinase Le-CTR1 141 334 - -
Lapu7g01375 969 PRINTS Tyrosine kinase catalytic domain signature 867 889 IPR001245 GO:0004672|GO:0006468
Lapu7g01375 969 PRINTS Tyrosine kinase catalytic domain signature 848 858 IPR001245 GO:0004672|GO:0006468
Lapu7g01375 969 PRINTS Tyrosine kinase catalytic domain signature 911 933 IPR001245 GO:0004672|GO:0006468
Lapu7g01375 969 PRINTS Tyrosine kinase catalytic domain signature 801 819 IPR001245 GO:0004672|GO:0006468
Lapu7g01375 969 PRINTS Tyrosine kinase catalytic domain signature 762 775 IPR001245 GO:0004672|GO:0006468
Lapu7g01375 969 MobiDBLite consensus disorder prediction 506 520 - -
Lapu7g01375 969 CDD STKc_MAP3K-like 694 937 - -
Lapu7g01375 969 ProSiteProfiles Protein kinase domain profile. 688 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01375 969 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01375 Lapu-Chr7 29169401 29179794 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01375 17 924 MAP Kinase Kinase Kinase AT1G08720 55.579 0.0 903
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lapu7g01375 PK_Tyr_Ser-Thr 1.8e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01375 - - gmx:100818780 1681