Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01372 ATGGGGTGTGTGATTGGTAGAGAAGTGTCATCGGGAATAATCTCCGAGGTGAAGGAGGAGAAGAGTGTGAGTGTTGAATCCAACAAGAAAGTTGATGAAGAGTCCACAAGCAGAGCCGAGGAGAACCTGGTAGAGGCTCAGAATGGTGAGAAGGAGAAGGAGAAGGAAAAGGAAGAGAAGGGTAGGGCTGATGGAGTCCGGGGGCCGAAGGGTGACAGAAGAAGATCAAAGCCAAATCCAAGGCTAAGTAATCCTCCGAAGCATTTGCAGGGGGAGCAAGTAGCAGCTGGGTGGCCACCTTGGCTAACAGCAGTGTGTGGTGAAGCCCTTAGTGGGTGGATTCCGCGAAAGGCTGACACATTTGAAAAAATTGATAAGATTGGTCAAGGAACTTATAGTAATGTATACAAGGCTAAAGACATATTGACGGGTAAGATTGTTGCACTGAAGAAGGTTCGATTTGACAATTTGGAACCTGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTTATTTTGCGAAGATTGGATCATCCCAATGTTATAAAGCTAGAAGGTTTAGTTACATCCAGAATGTCTTTGAGTTTGTACCTGGTGTTTGATTACATGGTGCATGATTTAGCTGGACTTGCTGCAAGCCCTGACATAAAATTTACGGAGCCTCAGGTTAAATGTTACATGCATCAACTCCTATCAGGACTTGAGCACTGTCATAGTCGAAACATACTTCACCGTGATATTAAAGGATCAAATCTTCTTATTGACAATGAAGGGATACTTAAAATTGCTGACTTTGGCCTTGCATCTTTCTTTGATCCAAACCGCGGGCATCCCATGACTAATCGTGTAGTTACCCTTTGGTACCGCCCTCTTGAGTTGCTTCTTGGTGCCACAGAATACGGTGTGGCCATCGACCTTTGGAGTGTTGGTTGCATTTTAGGAGAGTTATTGGCTGGGAAACCTATCCTGCCTGGACGTACAGAGGTGGAACAACTGCATAAGATATACAAGCTTTGTGGATCACCTTCTGATGAGTATTGGAAGAAGTCAAAGATGCCTAATGCTACCTTGTTTAAACCTCGACAACCATACAAGAGGTGTATAAGAGAGACATTTAAAGATTTTCCACCTTCAGCTCTGCCCCTTATCGAGACTCTTCTTGCAATTGATCCAGCAGAACGAAAGACTGCCTCAGATGCTCTAAGAAGTGAGTTCTTTACCACAGAACCTTATGCTTGTGATCCTCCTAGTCTTCCAAAATATCCACCAACAAAGGAAATGGATGCTAAACGACGTGATGATGAAGCAAGGAGATCAAGAGCTTCGGGCAAAGCTAATGTTGATGGTGCAAAGAAGCATCACCGCATGCGTGACCGTGCTGCCAAAGCTGCTGCTCCAGAAGCAAATGCTGAGCTTCAATCCAACGTGGATAGGAGGCGTTTAATCAGTCATGCAAATGCTAAGAGCAAGAGTGAGAAGTTCCCTCCACCGCATGAAGATGGACAACTAGGCTTTCCTTTGGGATCTTCTAATCACATTGATCCAGATATTGTTCCTTCTGACATCTCTTTGGGTGCAACCTCATACACCTTTTCCAAGGAACCATTCCAAGCTTGGTCAGGTCCCATTGGTAATCCTGCCACCATTAGTAAGCTGAAGAAACACACTGCAGGTGATGCATTGGATTTATCAAAACCATATAAAGGAACCCTCAAGGATAAAGTTAAAGGAAAGAAAATCATAGCCTAG 1746 0.4439 MGCVIGREVSSGIISEVKEEKSVSVESNKKVDEESTSRAEENLVEAQNGEKEKEKEKEEKGRADGVRGPKGDRRRSKPNPRLSNPPKHLQGEQVAAGWPPWLTAVCGEALSGWIPRKADTFEKIDKIGQGTYSNVYKAKDILTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSLSLYLVFDYMVHDLAGLAASPDIKFTEPQVKCYMHQLLSGLEHCHSRNILHRDIKGSNLLIDNEGILKIADFGLASFFDPNRGHPMTNRVVTLWYRPLELLLGATEYGVAIDLWSVGCILGELLAGKPILPGRTEVEQLHKIYKLCGSPSDEYWKKSKMPNATLFKPRQPYKRCIRETFKDFPPSALPLIETLLAIDPAERKTASDALRSEFFTTEPYACDPPSLPKYPPTKEMDAKRRDDEARRSRASGKANVDGAKKHHRMRDRAAKAAAPEANAELQSNVDRRRLISHANAKSKSEKFPPPHEDGQLGFPLGSSNHIDPDIVPSDISLGATSYTFSKEPFQAWSGPIGNPATISKLKKHTAGDALDLSKPYKGTLKDKVKGKKIIA* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01372 581 MobiDBLite consensus disorder prediction 1 93 - -
Lapu7g01372 581 MobiDBLite consensus disorder prediction 423 463 - -
Lapu7g01372 581 Pfam Protein kinase domain 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01372 581 CDD STKc_CDK9_like 121 405 - -
Lapu7g01372 581 SUPERFAMILY Protein kinase-like (PK-like) 116 413 IPR011009 -
Lapu7g01372 581 Gene3D Transferase(Phosphotransferase) domain 1 204 445 - -
Lapu7g01372 581 PANTHER CELL DIVISION PROTEIN KINASE 119 409 - -
Lapu7g01372 581 FunFam probable serine/threonine-protein kinase At1g54610 108 203 - -
Lapu7g01372 581 MobiDBLite consensus disorder prediction 13 79 - -
Lapu7g01372 581 MobiDBLite consensus disorder prediction 410 478 - -
Lapu7g01372 581 FunFam probable serine/threonine-protein kinase At1g54610 204 445 - -
Lapu7g01372 581 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Lapu7g01372 581 ProSiteProfiles Protein kinase domain profile. 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01372 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Lapu7g01372 581 Gene3D Phosphorylase Kinase; domain 1 108 203 - -
Lapu7g01372 581 Coils Coil 36 59 - -
Lapu7g01372 581 SMART serkin_6 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01372 Lapu-Chr7 29131941 29138445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01372 113 443 Core Cell Cycle Gene Families AT5G10270 53.602 7.54e-122 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lapu7g01372 Pkinase 7.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01372 K08819 - gmx:100817289 994.571