Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01364 ATGGGAATAGAGATTGTGGAGCCTAACACATGCATCAGGGGTTGCTGCACCAGCCCCTCTATTCCCCTTCATCTCCCTCCGGCTTCTTACACTCTCCTCTCGCCTATTGCCCGAGGGGCTGAGAGTGTTGTTTATGAAGGGACTTTGGATGACATGAGGGTTGCTGTGAAGAAACCCATCTTGTCAACTTCGGAAGACATTAATAAGTTTCATAAAGAATTGCAATTGCTGTGCAAGTTAGATCACCCGGGAATAGCGACATTGATTGCGGCCCATGCAAAACCGCCCAATTACATGTTTTTCTTCAAGTTATATGAATCTCGGAATCTTGCACAGAAGTTACATGTAGAAGAGTGGGTACCAACTCTCAGTGATGCACTTATGATGGCAATGCAATTAGCAAAGGCTTTGCAATATCTGCATAACCTCGGGATTGTGCATAGAGATGTGAAACCGGCAAATATTCTTCTTGACAAAAATCTTTGCCCACATCTCACAGATTTTGGTTTGGCAGAATACAAAAGTGATCTCAAGGGAGTTTCTATTCAGAATTGGAAGTCTTGTGGAAAGCCTACTGGTGGTTTCCACAAGAAAAATATGGTTGGAACACTGATTTACATGGCACCTGAGATATTAAGAAAGGAGTTGCATACAGAGAAGTCTGACGTATACAGTTTTGGGATATCAATCAATGAACTCCTTACTGGTGTTGTGCCATATACAGATCTTCGAACAGAAGCTCAGGCTCATACAGTGCTTGAGATGAACTATACCGAGCAGCAATTAACAGCAGCTGTTGTTTCTTATGGATTACGACCAGTCCTTGCTACTGAGGACTTGGGTATACCATCAAGATTATTATCAATGATTAACAATTGCTGGGATGCAAATCCTAATAACAGACCTGCTTTTGATGATATTGTCAAGGAACTTGATTTGATTATGGAGCACTGCAAGTTAAAGAAAGCAGAAGATATTTACATCAGACCTTTTAACTTGCATGTTGATCAACCTGTGGAAAAGACTGATCACCTTCAGGCTTATCAAGACAGTTTTAGTTGGTCCACTTGTGGTGAACTTTTGGCTAGGACTTCCTCTAGTGCAAATGATTCTGGTTTGATAACTAGGAGTGAGTTTTATGATGAGCCTTCTCTATACCACCCAATACTGTCTTGGGGATCTTATGCTACCTGTGGGAGAAGGGAGACAATGGAGGATACACATTTCATTCTGCCCCATATTTGTGGTGAAAAGGATGTGTATGCTTTTGGTATCTTTGACGGCCATAGGGGTGCAGCAGCTGCTGAGTTTTCTTGTAGAGCTGTACCAGCTGTTTTGCAGACTTCAGCTTTTATGGACAGTCCTGCTAATGCACTAGCAGAAGCATTCATTAGGACAGATGCTGCCTTCAGAAAAGAGCTTGATTCTTATCGCAAATCCAACAGATGCACCCAGAAGGATTGGCATCCTGGGTGTACAGCAATTGCTGCTCTTGTAGTCCGAAACAAGCTATTTGTTGGTAACGTTGGTGATTGCAGGGCAATCATATGTCGTGCTGGTAATCCAATTTCTTTAAGTAAGGATCACGTTGCAAGCTGTCTTCAAGAGAGAGAACGTGTTATTCGTCAAGGGGGCCATGTACATTGGCAAGTTGATACTTGGAGGATTGGTCTTCCTGCACTGCAGGTTACACGTTCTATTGGAGATGATGATCTGAAGCCTGCTGTCACTGCAGAACCTGAGATAACTGAGAGTACCTTGTGCCCAGAGGATGAATTTCTGGTCATGGCTAGTGATGGTCTGTGGGATGTGATAAGCAGTACAGAGGTGATAAATATCATAAAAGATACTGTTAAAGAGCCTGGAATGTGTTCTAAGAGGTTGGCTACTGAAGCAGTGGAACGTGGCAGCAAAGATAACATCACAGTTATCATCGTTTTCTTAAGACCTGTGTCTACGGCAGAGAGAATTTATTAG 1977 0.4274 MGIEIVEPNTCIRGCCTSPSIPLHLPPASYTLLSPIARGAESVVYEGTLDDMRVAVKKPILSTSEDINKFHKELQLLCKLDHPGIATLIAAHAKPPNYMFFFKLYESRNLAQKLHVEEWVPTLSDALMMAMQLAKALQYLHNLGIVHRDVKPANILLDKNLCPHLTDFGLAEYKSDLKGVSIQNWKSCGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGISINELLTGVVPYTDLRTEAQAHTVLEMNYTEQQLTAAVVSYGLRPVLATEDLGIPSRLLSMINNCWDANPNNRPAFDDIVKELDLIMEHCKLKKAEDIYIRPFNLHVDQPVEKTDHLQAYQDSFSWSTCGELLARTSSSANDSGLITRSEFYDEPSLYHPILSWGSYATCGRRETMEDTHFILPHICGEKDVYAFGIFDGHRGAAAAEFSCRAVPAVLQTSAFMDSPANALAEAFIRTDAAFRKELDSYRKSNRCTQKDWHPGCTAIAALVVRNKLFVGNVGDCRAIICRAGNPISLSKDHVASCLQERERVIRQGGHVHWQVDTWRIGLPALQVTRSIGDDDLKPAVTAEPEITESTLCPEDEFLVMASDGLWDVISSTEVINIIKDTVKEPGMCSKRLATEAVERGSKDNITVIIVFLRPVSTAERIY* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01364 658 ProSiteProfiles PPM-type phosphatase domain profile. 391 648 IPR001932 -
Lapu7g01364 658 SUPERFAMILY PP2C-like 383 650 IPR036457 -
Lapu7g01364 658 ProSiteProfiles Protein kinase domain profile. 30 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01364 658 FunFam Protein kinase and PP2C-like domain-containing protein 20 344 - -
Lapu7g01364 658 CDD PP2Cc 393 648 IPR001932 -
Lapu7g01364 658 Gene3D - 385 653 IPR036457 -
Lapu7g01364 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Lapu7g01364 658 SMART PP2C_SIG_2 406 648 IPR001932 -
Lapu7g01364 658 SMART PP2C_4 381 646 IPR001932 -
Lapu7g01364 658 Gene3D Transferase(Phosphotransferase) domain 1 23 337 - -
Lapu7g01364 658 SMART serkin_6 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01364 658 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 382 652 - -
Lapu7g01364 658 Pfam Protein phosphatase 2C 396 641 IPR001932 -
Lapu7g01364 658 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 25 312 - -
Lapu7g01364 658 SUPERFAMILY Protein kinase-like (PK-like) 23 332 IPR011009 -
Lapu7g01364 658 Pfam Protein kinase domain 30 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01364 Lapu-Chr7 29015470 29035942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01364 99 658 PP2C-type Phosphatase Gene Family AT2G40860 63.815 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Lapu7g01364 Pkinase 7.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01364 - - vun:114166829 1252.65