Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01362 ATGAGAGAGGAAGAGGAGTTACCTTCCCCAGAGGAACTCATGCCTTTATCACAAACCCTAATAACCCCTCACCTTGCCTTGGCCTTTCACATAACCAACTCTTCACACAATCACCAGATACTTCAACAACAACAACTTCCACCTCATCCAGGTTCCGCCACGGAGGAGGAACCGGCGCGGACCCTCAAGCGCCCGCGACTCGTCTGGACCCCACAACTCCACAAGCGCTTCGTGGATGCCGTGGCCCACCTAGGGATCAAGAACGCCGTTCCCAAGACCATAATGCAGCTGATGAGCGTCGACGGCTTGACCCGCGAAAACGTCGCCAGCCACCTCCAGAAATACCGCCTCTACCTGAAGCGCATGCAGGGATTGGCCGGAGGTGTCGCCGCTGACTCCGCCACCGACCACCTCTTCGCCAGCTCGCCTGTGCCGCCACACTTCCTGCAACCTGCTGCCCGCCCGACCTCTGACCATTACCTGCCCTTTGTGCCGGGGTTGCAGCATCAGCAGCACCGCCACCAGCAGCACATGGCGGCGGCGGCTCATTTTGGTTCGCCGCGAAATGCGCACTTTGAGCTACCCAATCTGTCAAGGATGGGGGCTCCCGTGCCGGGTTACGTGGAGGATGTGGAGTCAGGAGGGAGGAAGGTTCTTACTTTGTTTCCAGCTGGAGATGATTGA 684 0.5863 MREEEELPSPEELMPLSQTLITPHLALAFHITNSSHNHQILQQQQLPPHPGSATEEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLAGGVAADSATDHLFASSPVPPHFLQPAARPTSDHYLPFVPGLQHQQHRHQQHMAAAAHFGSPRNAHFELPNLSRMGAPVPGYVEDVESGGRKVLTLFPAGDD* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01362 227 MobiDBLite consensus disorder prediction 38 61 - -
Lapu7g01362 227 Pfam Myb-like DNA-binding domain 68 116 IPR001005 -
Lapu7g01362 227 NCBIfam myb-like DNA-binding domain, SHAQKYF class 65 117 IPR006447 GO:0003677
Lapu7g01362 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 120 IPR017930 -
Lapu7g01362 227 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 4 184 IPR044841 GO:0003700|GO:0006355
Lapu7g01362 227 FunFam Two-component response regulator 60 123 - -
Lapu7g01362 227 Gene3D - 61 123 - -
Lapu7g01362 227 SUPERFAMILY Homeodomain-like 61 121 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01362 Lapu-Chr7 28979454 28981171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01362 14 227 G2-like Transcription Factor Family AT5G05090 55.061 3.09e-70 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu7g01362 Myb_DNA-binding 1.4e-08 CL0123