Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01344 ATGAAGCTCCAACCCTTTTGGCTGCTTCTTCTATTCTACTTTTCCGCATTTCCGCATTTTGATGCTGCTGCTAATTCTTCTCCAATTGTTTCAGAAGCAAATGCTTTGTTGAAGTGGAAAGCCAGCCTTGACAGCCAGAGTCAAGCTTCTCTCTCTTCATGGACTGGCAATACTTCTTGCAATTGGCTCGGAATTGCCTGTGATGACTCCAATTATGTGTCCGAAATAAATCTTACAAGTATTGGATTAAGAGGTACGCTTGAAAATCTCAACTTCTTGATGTTTACAAACATTTGCACTCTAATTGTAAGTAGCAACTCTTTGAATGGAACTATTCCTCCTCAAATTGGAGTCTTGTCCAATCTTGATACTCTTGATTTGTCTTATAATGAACTCTCTGGTACCATTCCAACCACCATTGGTGATCTGTCCACACTTTCATACCTTAGTCTTCGTTCAAATGATCTCTCTGGGATTATTCCTTCTCAAATAACACAGTTGATTCACCTTCATTCACTGTTCATGGGTGACAATATTTTCAGTGGGTCCCTTCCTCGAGAAATAGGTAGATTGAGGAATCTGAGAATACTTGATATTCCTTGGTCGAATCTTACAGGGACAATCCCAATCTCTATAGAGAAGTTAAACAATTTGTTTCATCTAGATGTAGGAGGCAACAACCTTTCTGGCAGCATTCCTCAGAGAATTTGGCATATGAACTTAAAGCACTTGTCACTAGCAATTAATAACTTCAATGGTTCCATCCCCAAAGAAATTGTGAATTTGAGGAACCTGGAGATTCTATATCTTCAGCAAAGTGGCCTTTCTGGCACCATGCCCAAAGAAATTGGGATGTTACGGAAAATAATACATATCGACATGAGCAATTGTAATCTTACTGGGTCCATACCTATTTCAATTGGAGCTTTGACCAATATATCACTTCTCAAGTTACAAGACAACCAACTTTCTGGTCCCATTCCTGGTGAAATTGGTATGTTGATTAACCTCGATATTCTATTTCTTGGAACGAATAATCTTTCTGGCTCTATTCCTCGAGAAATTGAATTTTTGAAAAAACTCACTCAACTTGATTTGTCAGATAATTTTCTCTCTGGTAAAATCCCCTCCACAATTGGAAACTTGAGCAATTTAATTTTTCTTTACCTTTATGCAAACCAATTCTCTGGCTTTATCCCAGATGAAGTAGGAAATCTGCATTCCCTTGTAACAATCCAGTTGTCGAGCAACAACCTCTCTGGACCAATCCCGACTTCCATAGGTAACTTGGTCAATTTGGAATCCATTTTTCTTCATCAAAACAAATTATCTGGATCCATTCCTTCCACTATTGGAAATTTGTCTAAGCTTGGTCTATTAAATTTAATGCAAAATGATCTCAGTGGCAAGATTCCAATAGAAATGGACAGGCTTACTGCTTTTGAAAGTTTGCAGCTAAGTGAGAATAATTTTGTCGGCCAATTACCTCAGAACGTTTGCATTGGTGGAAACTTGACACATTTTGCTGCAAACAATAACAAATTCACTGGCACTATTCCGGAGAGTTTGAAGAATTGCTCTAGCCTTATAAGAATCAGGCTTCAGGAAAATCAACTAACTGGAAACATAACAGATGCTTTTGGTGTACTCCCAAACTTGAACTACATCGAATTGAGTGACAATAATTTTTATGGTCACCTTTCAACAAATTGGGGGAAGTTTCGTAGCCTCACAAGCCTCAAGATCTCTAACAATAATTTATCAGGTGTTATACCACCAGAACTTGGCGGGGCAACTGAATTACACCAACTTCAGTTATTCTCAAATCATCTTACAGGAAACATTCCTCAAGATTTATGTAATTTGGTCCTGTTGTTTGATCTATCACTCAACAACAATAATCTCTCAGGAAATATTCCCATAGAAATAGCATCAATGAAGAATCTTCAAATTTTGATGCTTGGATCAAATAATTTGTCTGGCTTAATTCCAACCCAACTTGGAAATTTGCTCAGCTTATTGAACATGAATTTGAGCCAGAATAAATTTGAGGGAAATATTCCTATAGAGATTGGAAAATTGAAATCTCTTACCAGTCTTGATCTCAGTGAAAATTTGTTGAGAGGAAGATTAACACATGTGCTTGGAGAATTGAACAAATTAGAAACATTGAATCTCTCTCACAATAGTCTTTCAGGTGATCTTTCTAGCTTTGATGATATGATGAGCTTGACATCTATTGATATATCTTACAATGAGTTCGAGGGTCCACTTCCAAACATTCCAGCCTTCCGCAAGGCTACAATTGAAACATTAAGAAATAATAAAGGCTTGTGTGGCAACGTTAGTGGCTTGGAGCCTTGTCCAACAAGTGAGAAATCACACAATCATCTGGCAAAGAAAGTCATAACAGTGGTTTTACCCCTTACCGTGGGCACTCTAATGCTGTCATTGTTTGCTTTTGGAGGCTTGTATTACTTATGCCAAGCTTCAACGAAAGTGGAAGACCAGGCTACCAATTTACAAACTCCAAACACATTTGCAATATGGAGTTTCGATGGCAAAATGGTATTTGAGAATATTATTGAAGCCACGGATAATTTTGACGACAAGCATCTCATTGGAGTTGGAGGGCAAGGACGTGTTTACAAAGCAATGTTACCCACAGGTCAAGTTGTTGCTGTAAAGAAACTCCATTCAGTTCCAAATGGAGAAATGCTCAACGAGAAAGCTTTCACTAGTGAAATCCAAGCTCTGACAGAAATTCGCCATCGTAACATTGTGAAGTTGTATGGATTTTGTTCTCATTCACGATTGTCATTTATGGTGTGTGAATTCTTGGAGAAGGGCAATGTCCAGAGGATTTTGAAGGATGATGAAGAAGCAATTGCATTTGATTGGAATAAGAGAGTGAATGTTGTTAAAGGTGTAGCAAATGCTTTATTCTACATGCACCATGATTGCTCACCACCAATTATTCATCGTGATATATCAAGTAAGAATGTTCTTTTGGATTTTGAATATGTGGCACACGTCTCAGATTTTGGAACTGCCAAGTTTCTTAATCCCAATTCATCTAATTGGACGTCATTTGTAGGAACCTTTGGATATGCTGCTCCAGAACTTGCATACACAATGGAGGTAAATGAGAAATGTGATGTCTATAGTTTTGGAGTGTTGGCATGGGAAATACTTCTCGGAAAGCACCCTGGTGATTTTGTATCTTCTTTATTGCTATCATCTCCATCCACTGGTGTGGCTTTAACACTTGATCATGCGACGTTGATGGATAAGTTGGACCAACGTCTCCCTCATCCAACAAAACTTACTGTTAAGGAGGTGACATCAGTTGCAAAGATAGCACTTGCTTGCTTGACTGAAACTCCACGATCTCGCCCTACTATGGAGCAGGTTGTCAAGGAGCTTGTAATGTAA 3435 0.3837 MKLQPFWLLLLFYFSAFPHFDAAANSSPIVSEANALLKWKASLDSQSQASLSSWTGNTSCNWLGIACDDSNYVSEINLTSIGLRGTLENLNFLMFTNICTLIVSSNSLNGTIPPQIGVLSNLDTLDLSYNELSGTIPTTIGDLSTLSYLSLRSNDLSGIIPSQITQLIHLHSLFMGDNIFSGSLPREIGRLRNLRILDIPWSNLTGTIPISIEKLNNLFHLDVGGNNLSGSIPQRIWHMNLKHLSLAINNFNGSIPKEIVNLRNLEILYLQQSGLSGTMPKEIGMLRKIIHIDMSNCNLTGSIPISIGALTNISLLKLQDNQLSGPIPGEIGMLINLDILFLGTNNLSGSIPREIEFLKKLTQLDLSDNFLSGKIPSTIGNLSNLIFLYLYANQFSGFIPDEVGNLHSLVTIQLSSNNLSGPIPTSIGNLVNLESIFLHQNKLSGSIPSTIGNLSKLGLLNLMQNDLSGKIPIEMDRLTAFESLQLSENNFVGQLPQNVCIGGNLTHFAANNNKFTGTIPESLKNCSSLIRIRLQENQLTGNITDAFGVLPNLNYIELSDNNFYGHLSTNWGKFRSLTSLKISNNNLSGVIPPELGGATELHQLQLFSNHLTGNIPQDLCNLVLLFDLSLNNNNLSGNIPIEIASMKNLQILMLGSNNLSGLIPTQLGNLLSLLNMNLSQNKFEGNIPIEIGKLKSLTSLDLSENLLRGRLTHVLGELNKLETLNLSHNSLSGDLSSFDDMMSLTSIDISYNEFEGPLPNIPAFRKATIETLRNNKGLCGNVSGLEPCPTSEKSHNHLAKKVITVVLPLTVGTLMLSLFAFGGLYYLCQASTKVEDQATNLQTPNTFAIWSFDGKMVFENIIEATDNFDDKHLIGVGGQGRVYKAMLPTGQVVAVKKLHSVPNGEMLNEKAFTSEIQALTEIRHRNIVKLYGFCSHSRLSFMVCEFLEKGNVQRILKDDEEAIAFDWNKRVNVVKGVANALFYMHHDCSPPIIHRDISSKNVLLDFEYVAHVSDFGTAKFLNPNSSNWTSFVGTFGYAAPELAYTMEVNEKCDVYSFGVLAWEILLGKHPGDFVSSLLLSSPSTGVALTLDHATLMDKLDQRLPHPTKLTVKEVTSVAKIALACLTETPRSRPTMEQVVKELVM* 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01344 1144 Gene3D Ribonuclease Inhibitor 183 282 IPR032675 -
Lapu7g01344 1144 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Lapu7g01344 1144 SUPERFAMILY L domain-like 68 329 - -
Lapu7g01344 1144 FunFam Nuclear pore complex protein NUP107 29 185 - -
Lapu7g01344 1144 FunFam Leucine-rich repeat receptor protein kinase MSP1 831 946 - -
Lapu7g01344 1144 FunFam Leucine-rich receptor-like protein kinase family protein 281 374 - -
Lapu7g01344 1144 Gene3D Ribonuclease Inhibitor 30 182 IPR032675 -
Lapu7g01344 1144 Gene3D Ribonuclease Inhibitor 360 476 IPR032675 -
Lapu7g01344 1144 ProSiteProfiles Protein kinase domain profile. 868 1144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01344 1144 PANTHER RECEPTOR-LIKE PROTEIN 55 505 1142 - -
Lapu7g01344 1144 SMART LRR_sd22_2 694 720 - -
Lapu7g01344 1144 SMART LRR_sd22_2 646 672 - -
Lapu7g01344 1144 SMART LRR_sd22_2 119 145 - -
Lapu7g01344 1144 SMART LRR_sd22_2 430 456 - -
Lapu7g01344 1144 SMART LRR_sd22_2 358 384 - -
Lapu7g01344 1144 Gene3D Phosphorylase Kinase; domain 1 829 946 - -
Lapu7g01344 1144 Gene3D Transferase(Phosphotransferase) domain 1 947 1144 - -
Lapu7g01344 1144 FunFam Leucine-rich repeat receptor protein kinase EMS1 186 280 - -
Lapu7g01344 1144 FunFam Uncharacterized protein 500 796 - -
Lapu7g01344 1144 Pfam Leucine rich repeat 100 156 IPR001611 GO:0005515
Lapu7g01344 1144 Pfam Protein kinase domain 869 1141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01344 1144 SUPERFAMILY L domain-like 532 780 - -
Lapu7g01344 1144 ProSiteProfiles Leucine-rich repeat profile. 720 742 IPR001611 GO:0005515
Lapu7g01344 1144 SUPERFAMILY L domain-like 241 616 - -
Lapu7g01344 1144 SUPERFAMILY Protein kinase-like (PK-like) 849 1142 IPR011009 -
Lapu7g01344 1144 FunFam MDIS1-interacting receptor like kinase 2 947 1144 - -
Lapu7g01344 1144 ProSitePatterns Tyrosine protein kinases specific active-site signature. 992 1004 IPR008266 GO:0004672|GO:0006468
Lapu7g01344 1144 FunFam MDIS1-interacting receptor like kinase 2 isoform A 375 465 - -
Lapu7g01344 1144 Gene3D Ribonuclease Inhibitor 477 792 IPR032675 -
Lapu7g01344 1144 PRINTS Leucine-rich repeat signature 718 731 - -
Lapu7g01344 1144 PRINTS Leucine-rich repeat signature 122 135 - -
Lapu7g01344 1144 SMART LRR_typ_2 646 669 IPR003591 -
Lapu7g01344 1144 SMART LRR_typ_2 358 382 IPR003591 -
Lapu7g01344 1144 SMART LRR_typ_2 574 598 IPR003591 -
Lapu7g01344 1144 SMART LRR_typ_2 478 502 IPR003591 -
Lapu7g01344 1144 SMART LRR_typ_2 215 239 IPR003591 -
Lapu7g01344 1144 SMART LRR_typ_2 119 143 IPR003591 -
Lapu7g01344 1144 SMART LRR_typ_2 718 740 IPR003591 -
Lapu7g01344 1144 SMART LRR_typ_2 430 454 IPR003591 -
Lapu7g01344 1144 SMART LRR_typ_2 694 717 IPR003591 -
Lapu7g01344 1144 Gene3D Ribonuclease Inhibitor 286 359 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01344 Lapu-Chr7 28662389 28665924 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01344 27 618 Receptor kinase-like Gene Family AT4G08850 35.852 1.96e-100 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu7g01344 Pkinase 3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01344 - - gmx:100808316 1618.21