Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lapu7g01318 | ATGGCGATTGAAACTGACTCAAGAGATAGCTCTCTTACTCTGATAAAACAAGGAGCGGAAGCTAGGGTTTTTGAGTCTTCTTTTGTGGGAAGGAGATGTGTTGTCAAGGAGCGTTTCTCAAAGAAGTACAGGCATCCAACTTTGGATTCTAAATTGACACTCAAGCGCTTAAATGCGGAGGCGAGGTGCGTGACCAAAGCAAGGAAACTTGGGGTTTGTACTCCCGTGCTGTATGGTATGGATCCTGTGTTGCACACTTTAACATTTGAGTATGTTGAGGGTCCTTCAGTCAAGGACGTATTTCTTGAATTCGGGTCACGTGGCCTTGATGATGAGGGTCTGGACAACATTGCAACCCAAATTGGTCATGCAATTGGAAAGCTACATGATGGTGGTCTTGTTCATGGTGATTTAACAACATCAAACATGTTACTCAAGAATGGTACCAATGAGTTGGTTCTTATTGATTTTGGTTTGAGCTTCACTTCAACTCTACCGGAAGATAAGGCTGTTGATTTGTATGTTCTGGAAAGAGCTATTCTGTCAATGCATTCTTCGTGTGGGAATGTGATGGATCAGATACTTGCTGCATACCGCAAGTCATCAAAGCAGTGGTCATCCACATTGAACAAGTTGGCACAAGTGAGGCAAAGAGGACGAAAGAGGACCATGGTTGGATGA | 681 | 0.4361 | MAIETDSRDSSLTLIKQGAEARVFESSFVGRRCVVKERFSKKYRHPTLDSKLTLKRLNAEARCVTKARKLGVCTPVLYGMDPVLHTLTFEYVEGPSVKDVFLEFGSRGLDDEGLDNIATQIGHAIGKLHDGGLVHGDLTTSNMLLKNGTNELVLIDFGLSFTSTLPEDKAVDLYVLERAILSMHSSCGNVMDQILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG* | 227 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lapu7g01318 | 226 | SMART | serkin_6 | 9 | 225 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lapu7g01318 | 226 | Gene3D | Transferase(Phosphotransferase) domain 1 | 110 | 223 | - | - | |
| Lapu7g01318 | 226 | Pfam | Protein kinase domain | 51 | 162 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lapu7g01318 | 226 | NCBIfam | KEOPS complex kinase/ATPase Bud32 | 18 | 220 | IPR022495 | GO:0004674 | |
| Lapu7g01318 | 226 | SUPERFAMILY | Protein kinase-like (PK-like) | 12 | 174 | IPR011009 | - | |
| Lapu7g01318 | 226 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 133 | 145 | IPR008266 | GO:0004672|GO:0006468 | |
| Lapu7g01318 | 226 | FunFam | TP53-regulating kinase isoform X1 | 20 | 92 | - | - | |
| Lapu7g01318 | 226 | Gene3D | Phosphorylase Kinase; domain 1 | 20 | 92 | - | - | |
| Lapu7g01318 | 226 | FunFam | Protein kinase superfamily protein | 107 | 223 | - | - | |
| Lapu7g01318 | 226 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 5 | 226 | IPR022495 | GO:0004674 | |
| Lapu7g01318 | 226 | ProSiteProfiles | Protein kinase domain profile. | 9 | 226 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lapu7g01318 | 6 | 160 | MAP Kinase Kinase Kinase | AT5G66710 | 28.302 | 4.58e-07 | 47.8 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | TKL-Pl-4 | Lapu7g01318 | Pkinase | 1.8e-10 | CL0016 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lapu7g01318 | K08851 | - | gmx:100782376 | 393.275 |