LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu7g01316	ATGGAAGTGGACAAGGAAAACATTGCATCAGCTATTACTGCAGAACCATCTTTACCTGCCTCTGAAGGTCAAGATACTGTTTCTGATAATGCATCTTTACCCCATTCAGTACAACCTGTTATTCCACCGGTTATTGCACCTTCTGTTGTGCCTCCTTTAGCTCCAATTCCTGCAATTCCTCCCCCTCGTCTGCTGGCACCACTTCCAGTTCGGCCTCCTGTCATTAGGCCACCTGTGCTACAAAATGGTGAGGTTGCATCAAGTGACTCTGACTCAGACAATGATGACTCAAATACAAGAATTAACCAGGGAACTGGGGAGTATGAGATATCTGAAGAGAGTAGACTGGTGAGAGAGCGGCAGGAAAAGGCAATGCAAGAACTCATGATGAAGAGGCGTGCTGCTGCTCTTGCTGTTCCCACTAATGATATGGCTGTGCGAGCTCGGCTCCGGCATCTTGGCGAGCCAATAACTCTGTTTGGTGAGAGAGAGATGGAGAGACGGGACAGGCTGCGGATGATTATGGCAAATCTAGATGCGGAGGGTCAACTGGAGAAGCTGATGAAAGCTCATGAGGATGAAGAAGCCGCGGCTGCTGCTCCAAAAGATGAGGCTGAGGAAGAATTGCAGTATCCATTTTACACTGAAGGGTCAAAGGCTCTCCTTGATGCCAGAATTTTTATTGCTAAATATTCTTTGGCAAGGGCAGCATTACGGATTCAACGTGCACAGAGAAGAAGGGATGATCCAGATGAAGATATGGATGCAGAGATAGATTGGGCATTAACGCAGGCTGGGAATTTGAGTCTTGAATTCAGTGAAATTGGAGATGATCGACCACTTTCTGGTTGCTCCTTCTCGAGGGATGGAAAATGGCTTGCTACCTGTTCTCTGACTGGAGCTTCCAAGTTGTGGAGCATGCCGAAAATAAAAAAGCATTCCACCTTGAAGGGGCACACAGAGCGTGCTACAGATGTTGCTTATTCTCCTATTCATGATCATTTAGCAACTGCCTCTGCTGATCGAACAGCAAAGTATTGGAATGATCAAGGATCACTTTTGAAGACATTCGAGGGTCATCTAGACCGTCTTGCACGTATTGCCTTCCATCCATCAGGGAAGTACCTGGGCACTGCTAGTTTTGATAAGACATGGAGATTATGGGACATAGAAACAGGGGAGGAGTTGCTTCTTCAAGAAGGCCATAGTAGAAGTGTATATGGTTTGGCTTTCCACCGTGATGGATCATTAGCTGCATCTTGTGGACTAGACTCTCTGGCTCGTGTTTGGGACCTCCGAACTGGAAGAAGTATTCTTGCACTGGAAGGTCATGTCAAGCCGGTTCTTGGCATCAGTTTTTCACCTAATGGATATCATCTAGCCACGGGTGGTGAAGACAACACTTGTCGGATTTGGGATTTGAGGAAGAAGAAATCCTTTTATACTATTCCTGCTCACTCCAATTTAATATCACAAGTTAAATTTGAGCCACAAGAAGGTTACTTTTTGGTAACTGCCTCGTATGACATGACTGCTAAGGTTTGGTCAGGCCGTGACTTTAAGCCTGTGAAGACACTATCTGGGCATGAAGCAAAAGTTACCTCTGTGGATGTTCTTGGAGATGGCGGGCACATTGTGACAGTCTCCCATGATCGCACCATAAAACTGTGGTCCAGCAATACAACTGACGAACAAGCAATGGATGTTGATTAA	1713	0.46	MEVDKENIASAITAEPSLPASEGQDTVSDNASLPHSVQPVIPPVIAPSVVPPLAPIPAIPPPRLLAPLPVRPPVIRPPVLQNGEVASSDSDSDNDDSNTRINQGTGEYEISEESRLVRERQEKAMQELMMKRRAAALAVPTNDMAVRARLRHLGEPITLFGEREMERRDRLRMIMANLDAEGQLEKLMKAHEDEEAAAAAPKDEAEEELQYPFYTEGSKALLDARIFIAKYSLARAALRIQRAQRRRDDPDEDMDAEIDWALTQAGNLSLEFSEIGDDRPLSGCSFSRDGKWLATCSLTGASKLWSMPKIKKHSTLKGHTERATDVAYSPIHDHLATASADRTAKYWNDQGSLLKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDIETGEELLLQEGHSRSVYGLAFHRDGSLAASCGLDSLARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKKKSFYTIPAHSNLISQVKFEPQEGYFLVTASYDMTAKVWSGRDFKPVKTLSGHEAKVTSVDVLGDGGHIVTVSHDRTIKLWSSNTTDEQAMDVD*	571

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu7g01316	570	ProSiteProfiles	Trp-Asp (WD) repeats profile.	441	482	IPR001680	GO:0005515
	Lapu7g01316	570	FunFam	U4/U6 small nuclear ribonucleoprotein Prp4	484	560	-	-
	Lapu7g01316	570	SUPERFAMILY	WD40 repeat-like	270	557	IPR036322	GO:0005515
	Lapu7g01316	570	ProSiteProfiles	Trp-Asp (WD) repeats circular profile.	316	348	-	-
	Lapu7g01316	570	ProSiteProfiles	Trp-Asp (WD) repeats profile.	316	348	IPR001680	GO:0005515
	Lapu7g01316	570	Pfam	pre-mRNA processing factor 4 (PRP4) like	146	172	IPR014906	-
	Lapu7g01316	570	CDD	WD40	280	558	-	-
	Lapu7g01316	570	ProSiteProfiles	Trp-Asp (WD) repeats profile.	483	525	IPR001680	GO:0005515
	Lapu7g01316	570	MobiDBLite	consensus disorder prediction	1	39	-	-
	Lapu7g01316	570	PRINTS	G protein beta WD-40 repeat signature	460	474	IPR020472	-

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu7g01316	361	557	U-box Gene Family	AT2G33340	22.172	2.75e-09	57.8

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu7g01316	K12662		-	gmx:100788948	937.947

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lapu7g01316	7	28161763	28167674	Lapu7g01316	7	28161763	28167674	ECH

Showing 1 to 1 of 1 entries