Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01312 ATGGCAAAGAGGAAGACCTGGTTTGGATGGGTGAAAAGGCTATTCACTTCTGAGTCAAAGGACAACAAAAAGCCAAACAAATGGGGATGGAGTTTTGGAAGGATTAAGCAGAAAAAGTATCCTACAATTACAGCTCCAAATAGGACATTGATTGAAGCAAGTTCAGAGCAGAGAAAACATGCTTTAACTGTGGCTATTGCAACTGCAGCAGCTGCTGAAGCTGCAGTTGCTGCTGCACATGCTGCTGCTGAGGTTGTTAAGCTCACAGGTGCCTCTCGTTCTTACTCATATCTTTCCAAGGGAGACAGAAGTTTAGCAGCCATCAAGATCCAAAGCGCATACCGTGCACATCTTGCTAGGAAAGCATTAAGAGCATTGAAGGGAGTTATAAGACTGCAAGCCATAATTCGTGGTCAAGCTGTGAGACGTCAAGTGCCAAACACTTTACAGAATTTTCCCTCCAATGCAAGAAATCAGGTGGAAATTCTTGAAAGAAGTAGCCATGCGGCTGAACATATCAAGCAAAATCCAAAACAAAAGAAAAAGTTTGAAGATAAGGAACTGAAGTCTGAATGCGATAGTCAAAGAACATGGGATTGTAGCTTGCTCTCGAGAGAAGACATTGAAGCTATATGGTATAGAAAACAAGAGGCCATGGTCAAAAGAGAGCGCATGAAACAGTACTCTTCTTCACAAAGGGAGAGAAAAAATCCTCAAATGGTGGAAGAATCTGTGCACAACATGAACTTTGGAAGAGAGAGCTGTCGTACACTTGGAGAGTGGCTACATAAAGAAACAAGTGATTGGGATGTGATCTATAAGCCAATTACTCTTCCTTCAAACTTGATGACAACAAAAGAAGAATCACAAGAAGGGTTGAGTCCACACACTTCAATCCCAAGGAAATCATTTTCTCTTGTAAAAAGAAGCTTAAATGGGGATGAGAGTTCCATGTCAAATTCTCCAGTTTTCCCTACATACATGGCTGTTACTGAATCCAGCAAAGCCAAGATGAGGTCTATTAGCACACCAAAGCAAAGAACAGGAATCCTGGATATATGCTCCAATCACAATGAACCTCACAAGGAAGGAATTTCCTTTTACTCTTCTTATTATGGTGCAACTAGTAGCACCAATGAAAACAATGCAAGTTACCAACAAAGATGCTAG 1170 0.412 MAKRKTWFGWVKRLFTSESKDNKKPNKWGWSFGRIKQKKYPTITAPNRTLIEASSEQRKHALTVAIATAAAAEAAVAAAHAAAEVVKLTGASRSYSYLSKGDRSLAAIKIQSAYRAHLARKALRALKGVIRLQAIIRGQAVRRQVPNTLQNFPSNARNQVEILERSSHAAEHIKQNPKQKKKFEDKELKSECDSQRTWDCSLLSREDIEAIWYRKQEAMVKRERMKQYSSSQRERKNPQMVEESVHNMNFGRESCRTLGEWLHKETSDWDVIYKPITLPSNLMTTKEESQEGLSPHTSIPRKSFSLVKRSLNGDESSMSNSPVFPTYMAVTESSKAKMRSISTPKQRTGILDICSNHNEPHKEGISFYSSYYGATSSTNENNASYQQRC* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01312 389 ProSiteProfiles IQ motif profile. 103 131 IPR000048 GO:0005515
Lapu7g01312 389 Pfam IQ calmodulin-binding motif 106 124 IPR000048 GO:0005515
Lapu7g01312 389 Gene3D - 103 151 - -
Lapu7g01312 389 Pfam Protein of unknown function (DUF4005) 309 352 IPR025064 -
Lapu7g01312 389 MobiDBLite consensus disorder prediction 167 186 - -
Lapu7g01312 389 PANTHER IQ-DOMAIN 5-RELATED 4 363 - -
Lapu7g01312 389 ProSiteProfiles IQ motif profile. 127 154 IPR000048 GO:0005515
Lapu7g01312 389 SMART iq_5 102 124 IPR000048 GO:0005515
Lapu7g01312 389 SMART iq_5 125 146 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01312 Lapu-Chr7 28053332 28056048 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01312 1 389 IQD Protein Family AT5G03960 43.066 1.17e-79 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01312 - - gmx:100800767 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01312 7 28053332 28056048 Lapu7g01312 7 28053332 28056048 ECH