Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01300 ATGCAAACCTTTGAACCCAATTTCACCTTTTGCTTTCCAAACACCTTAGAGGCCTCAATTTCACAATCTGATATTTGTATCAATGATTACTTGGTACCCCAAGAAGTTCAATTTCAAGTTCACATGAGCAATAATAACAGCACACCCATGAAACCTATGCCTCAAGTCACATCTTTCTCCAAGCCTCCAAGGTCCTCAAATCTAAGCAACCGCAAACCCTCCTTGAAAAACATCACAATCCCTTCCATAACCTCAGGTCTTGTTATGCCACACCACATGGAATCTGCAGCAGCCACAACAACATCATTCGGTACAACCTTGTATAACAACAACAATCAAGTTTCTTCTTCTTCTTTGGATGAAGCCAGCAGTAATACCAGAGAGGATAAGCACTATAGAGGGGTTAGGAGAAGGCCGTGGGGGAAGTTTGCTGCAGAGATTCGGGACCCCAATAGAAAAGGCTCAAGGGTGTGGCTTGGAACCTTTGACACAGCCATAGAAGCTGCTAAGGCTTATGACAAAGCTGCTTTCAAGATGAGAGGGAGCAAAGCCATATTGAACTTCCCTTTGGAGGTTGGGGAGACTGAAGAACCAGTTTCAAGCTGCATCAAGGTTGGTGTGAAGAGAGAAAGAGAGGAAGAAAGTGAAGGGAACAACTATGAGGAAAGTGAGTTTAGCAATAACAATAGTAATAAGATCATGAAGAATGGAGACTGCTCTCCTAAAGGGGTGTGCCCTTTGACTCCATCATGTTGGAAAGGCTTTTGGGACACTGATGTTATGGGAACCATCTTTAGTGTGCCTCCTTTGTCACCATTATCTCCACTCATGGTTGTTTGA 840 0.4357 MQTFEPNFTFCFPNTLEASISQSDICINDYLVPQEVQFQVHMSNNNSTPMKPMPQVTSFSKPPRSSNLSNRKPSLKNITIPSITSGLVMPHHMESAAATTTSFGTTLYNNNNQVSSSSLDEASSNTREDKHYRGVRRRPWGKFAAEIRDPNRKGSRVWLGTFDTAIEAAKAYDKAAFKMRGSKAILNFPLEVGETEEPVSSCIKVGVKREREEESEGNNYEESEFSNNNSNKIMKNGDCSPKGVCPLTPSCWKGFWDTDVMGTIFSVPPLSPLSPLMVV* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01300 279 SMART rav1_2 131 195 IPR001471 GO:0003700|GO:0006355
Lapu7g01300 279 MobiDBLite consensus disorder prediction 43 74 - -
Lapu7g01300 279 CDD AP2 130 189 IPR001471 GO:0003700|GO:0006355
Lapu7g01300 279 PANTHER DNA-BINDING DOMAIN 91 228 IPR044808 GO:0003700|GO:0009873
Lapu7g01300 279 Gene3D AP2/ERF domain 130 191 IPR036955 GO:0003700|GO:0006355
Lapu7g01300 279 Pfam AP2 domain 131 181 IPR001471 GO:0003700|GO:0006355
Lapu7g01300 279 PRINTS Ethylene responsive element binding protein signature 132 143 IPR001471 GO:0003700|GO:0006355
Lapu7g01300 279 PRINTS Ethylene responsive element binding protein signature 171 191 IPR001471 GO:0003700|GO:0006355
Lapu7g01300 279 FunFam Ethylene-responsive transcription factor 2 130 191 - -
Lapu7g01300 279 ProSiteProfiles AP2/ERF domain profile. 131 189 IPR001471 GO:0003700|GO:0006355
Lapu7g01300 279 SUPERFAMILY DNA-binding domain 131 191 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01300 Lapu-Chr7 27834911 27836286 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01300 128 272 AP2-EREBP Transcription Factor Family AT5G51190 57.047 3.01e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lapu7g01300 AP2 5.1e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01300 K09286 - gmx:100795866 327.791