Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01296 ATGGGCGTTGAGAACTACCACGTGATTGAACTCGTAGGCGAGGGTTCCTTCGGGAAGGTATACAAGGGAAGGCGCAAGCACACGGGGCAGACCGTTGCGATGAAGTTCATAGTGAAGCACGGCAAAACTGAGAAGGATATTCACAATTTAAGGCAGGAAATCGAGATCTTGAGAAAGTTGAAGCATGGAAATATTATTCAAATGCTTGATTCTTTTGAAAGCCCGCAAGAATTTTGTGTCGTCACAGAATTTGCACAAGGTGAGCTATTTGAGATTCTTGAGGATGATAAGTGCCTTCCGGAAGAGCAAGTTCAAGCAATTGCAAAGCAATTGGTAAAAGCTTTACATTATTTGCATTCCAATCGGATCATCCATCGCGATATGAAGCCCCAAAATATTCTAATTGGTGCTGGATCTGTTGTCAAGCTTTGTGATTTTGGGTTTGCACGTGCAATGTCCACAAATACAGTTGTTTTGCGATCTATAAAAGGTACTCCGTTGTACATGGCTCCTGAGCTTGTACGTGAACAACCTTACAACCACACTGTAGATTTATGGTCTCTTGGTGTAATACTGTACGAGTTATTTGTTGGCCAACCACCATTTTATACAAATTCTGTATATGCTCTCATCAGACACATTGTTAAGGATCCTGTTAAATATCCTGATCGCATGAGTCCAAATTTCAAAAGCTTTTTAAAGGGTTTGCTTAACAAGGCACCGGAAAGTCGACTAACTTGGCCGGCTCTTCTTGAGCACCCATTTGTTAAAGAAACCTCTGATGAACCCGAGGCCAGGGAATTGCGAGAGATAAATGGTTCACGCATTCGCAGTGATGCAGCACGGATGGTTGAAGGAAAAGCCATTCAAAATCCAACAGGCAAAACCAATCACATGGTAGGTATGGAGGGCAATTTTGCTTCACCGCTTCAGAGTGAAGTTCAGTTAAATGGTCCTAACTTAGACAGAACTAATTCTTCAGTGCTTGATGAGTCCCCAGAATTTTCACATCAAAATATAGGAGAGTCAGGCTGCCAAAGATTGGACAGACTTGAAAATAACTCTCGCACAGTAAAAAGTGCCAAAATAATTGGTCAAGATAATGAAGCGTTGGGTCATATTCTGCTACCACTGAAAAGATGGTCAAAAGGATCTCAAAATATTTGCAGTGATCAAGATGTTCCTCAATCAAATCAGTCATTGAGGATTCTCTCAAACCTAGTTGCAGCTGGTGCCTTCAATTCTAGTGGACGAATAGATGAACTAATAAGAGAACTCCTTGCGTTTACTGGATCGGTTATTGCCATTAAGTCCTCTGAAGTTACTGACATGGTGGCAAAGGGTTTCTCCATCACTAAAATTTTGTTAGATAATGGTGGAAGTTGCTCTTCAAGCTCTTATCTAAGTCACTGGGTTGAATTTTTTGAGATCTATTCTCAGGTTGTGGCATCAAATAATGATGCATCTGGAAGAGTTCTGTATGAATCCAGTGCCTGCATTACAGTCATGCTGTCTAGAGTTGCTCAGGTTTTTAAGTCATCTCCTCAAATTTCAGGGCAAGAGACACTGAATGAAACAGCCAACAGAATTTTAGACCACGCAAAAACAATGGGTTTAGTGGACCATCTATGTCTGTGTTTAGCCACTTCAGGATCAAGTCTTATTTCAGGTTCTTCCAACATGCTAAGGGCTGCTTCTGAAGCATGTAGAGCTATCTGGTGTTTGATTAATGCACTGGATATTCTTTTTATGAAAAAAAGTGCCATTTTGTTTCCCATTAATGCTTTGCGCAGTCATTCTTTGCATAGGATGGAAGTTGTGCAACATGAACAAAATCTCTTGGAGAAAGCAGATTCAACAAAAATTGTTGATGCAATGACAAGAGCATTCCTTAGATCTAAAGCTGTTCAGGTTGCTGTTTACTATTGTTTTCACCAACGACTTGAGTCTGCAATGAATTGTTGTCTTCAGCTTTTATCAAGGTGCTGCCTACATAATGAAATTATTCCAGCTCTCCTTTGTGGTCTTCCTAGTTCCCTTCCGGTGACTACTGTTGTTAGTGGGGGTGGTGATGGAACTATTGTTTCAGAAGTTTTCTCTGTTTTATCGTTATGCGGTTCCTCTGTTAACAAAGAAGCACAGAGTATTGAACCAAGTAATGTAAAGTGCAAATTAACAAATCCTTCTGCTCTCGTTCGTCATTCATGTCTTGTTCTCGCAATAATTGCTCAATGTTTGAAGTCAACTGGAAGAAATTCAGCAATGTTTATGCTTACTACCGCACCAAAGAAGCAGCTTGCTCGACTTTCAGTGCTTTCTCATCATATTACTTCTGATGATAAAATAAAAGCCTCTATCGAACCTCAAAGTGCATCAGCCATGTTGGCTTTGGCATCCATTCTGTCTCTCGAATCTGGGGCTTTAGTTGAGTCTCCAATATCTGAAATTGCAATGCCTTTAATTCCTCGAACCTCTACACTAAGTGATCATCTTAAATTTTCATCTGGCAATGAAAATGAATTGGACCCTTGCAACTTCAGTGGGAAACTCTCGTATTGGCAAGGTGTAAGAGATGGGTATGTTGGTCTATTAGATTCCAGACTCAAGTGGGGAGGACCATTAGCTGTTCAGCAGCTGTGTGCAAGTGGCATTCCTCTACTTCTTATGGGCTTATTAGGCAATGATGTTTTAAATGCTTCTCATGGAAATGAGCATCTAAATGATAGAGTTGGATTGTCTCCTATTGGTGTTGTATGGACAATTTCATCATTATGTCATTGTCTTTCTGGCGGTGCTTTGATTTATCGTCAAATTTTGATTAGGAATGAACATATTAAGCTCATTTCCAATTTGATATGCGATGTTCATATCAAGTTGGTGAAATGCTGGATTGGACCTGGTGGAGGGAGAGCAGGAGTCAGAGATCTAATAAATGCTGTGATAGATATCTTAGCATTTCCTTTTGTTGCTCTGCAAAATGCACCTGGCTTGCCTTCAGCCACCGCTTCTGTCAGCAGTGGGTTTCTTCTTAATATGGGCTCCCCTGGTCAGAGAGTATGCATGGAAGATAAGCGTATAGTTAAGGCAATTGAAGAAGACATGGGAAAGTATATTAAGATACTTGTAGAGGTTGGTGTGCCTGGTATTATCCTTCGGTGTGTAGATCATATGGATTTGAATGATTTGGGCAGGCCAGTTGCATTTCTGGCTAAGATGGTCTGCCACCGACCTTTGGCAATCCAACTTGTGAGTAAAGGTCTTTTGGATCCAAATAGAATGAGAAAGTTGTTTGACTGTTCGGGCCCAAAAGAGGTCACGCTGGATGCTCTTATGATTATTTCTGATCTTGCTCGCATGGACAAGGGATTCTATGAGTACATTAAAGGTGCTACTATTTTGGAGTTCTTGAAAGATTTTCTTTCGCACGAGGATCCCAATATGCGTGCCAAAGCTTGCAGTGCTCTTGGAAACATGTGCCGTCATAGCGCCTATTTTTATAGTTCACTTGCTGGACATCAAATTGTTGGTATTCTTATCGAAAGATGTTCTGATCCAGACAAACGAACACGAAAGTTTGCTTGTTTTGCTATTGGAAATGCGGCTTACCACAATGACTTGTTGTATGAGGAGCTGAGGAGATCGATTCCTCATTTAGCAAATTTGTTACAAATGGCTGAGGAAGATAAGACAAAGGCAAATGCAGCAGGTGCACTTAGCAATCTGGTTCGCAACTCTGACAAACTTTGTGAAGACATCGTGTCTAAAGGAGCGGTTCAGTCTCTGCTGAAATTAATTTCTGATTGTGCGGTATCAGCACTAAACCCAGGCAGAAATGATTCAGGAAACGAATCTCCGCTTAAGATCGCTCTCTTTTCCCTGGCAAAGATGTGCGCACATCCACTCTGCAGACAGTTCATCCGTTCATCACCTTTGTTCCCTGTGATTGGAAGGCTTCAGCAGTCCCCAGAATCATCCATTGCCAAATATGCCTCCGTCATCATTAGCAAAGTTGCTGAACCTTGA 4023 0.4124 MGVENYHVIELVGEGSFGKVYKGRRKHTGQTVAMKFIVKHGKTEKDIHNLRQEIEILRKLKHGNIIQMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQAIAKQLVKALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYNHTVDLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDRMSPNFKSFLKGLLNKAPESRLTWPALLEHPFVKETSDEPEARELREINGSRIRSDAARMVEGKAIQNPTGKTNHMVGMEGNFASPLQSEVQLNGPNLDRTNSSVLDESPEFSHQNIGESGCQRLDRLENNSRTVKSAKIIGQDNEALGHILLPLKRWSKGSQNICSDQDVPQSNQSLRILSNLVAAGAFNSSGRIDELIRELLAFTGSVIAIKSSEVTDMVAKGFSITKILLDNGGSCSSSSYLSHWVEFFEIYSQVVASNNDASGRVLYESSACITVMLSRVAQVFKSSPQISGQETLNETANRILDHAKTMGLVDHLCLCLATSGSSLISGSSNMLRAASEACRAIWCLINALDILFMKKSAILFPINALRSHSLHRMEVVQHEQNLLEKADSTKIVDAMTRAFLRSKAVQVAVYYCFHQRLESAMNCCLQLLSRCCLHNEIIPALLCGLPSSLPVTTVVSGGGDGTIVSEVFSVLSLCGSSVNKEAQSIEPSNVKCKLTNPSALVRHSCLVLAIIAQCLKSTGRNSAMFMLTTAPKKQLARLSVLSHHITSDDKIKASIEPQSASAMLALASILSLESGALVESPISEIAMPLIPRTSTLSDHLKFSSGNENELDPCNFSGKLSYWQGVRDGYVGLLDSRLKWGGPLAVQQLCASGIPLLLMGLLGNDVLNASHGNEHLNDRVGLSPIGVVWTISSLCHCLSGGALIYRQILIRNEHIKLISNLICDVHIKLVKCWIGPGGGRAGVRDLINAVIDILAFPFVALQNAPGLPSATASVSSGFLLNMGSPGQRVCMEDKRIVKAIEEDMGKYIKILVEVGVPGIILRCVDHMDLNDLGRPVAFLAKMVCHRPLAIQLVSKGLLDPNRMRKLFDCSGPKEVTLDALMIISDLARMDKGFYEYIKGATILEFLKDFLSHEDPNMRAKACSALGNMCRHSAYFYSSLAGHQIVGILIERCSDPDKRTRKFACFAIGNAAYHNDLLYEELRRSIPHLANLLQMAEEDKTKANAAGALSNLVRNSDKLCEDIVSKGAVQSLLKLISDCAVSALNPGRNDSGNESPLKIALFSLAKMCAHPLCRQFIRSSPLFPVIGRLQQSPESSIAKYASVIISKVAEP* 1341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01296 1340 Gene3D Transferase(Phosphotransferase) domain 1 2 305 - -
Lapu7g01296 1340 SUPERFAMILY ARM repeat 1033 1337 IPR016024 -
Lapu7g01296 1340 FunFam Aurora kinase A 1 88 - -
Lapu7g01296 1340 ProSiteProfiles Protein kinase domain profile. 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01296 1340 FunFam Serine/threonine-protein kinase 36 3 314 - -
Lapu7g01296 1340 Coils Coil 1208 1228 - -
Lapu7g01296 1340 SMART serkin_6 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01296 1340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Lapu7g01296 1340 Pfam HEAT repeats 1134 1238 - -
Lapu7g01296 1340 SUPERFAMILY Protein kinase-like (PK-like) 4 257 IPR011009 -
Lapu7g01296 1340 Coils Coil 40 60 - -
Lapu7g01296 1340 FunFam Serine/threonine-protein kinase TIO 1067 1336 - -
Lapu7g01296 1340 PANTHER PROTEIN KINASE RELATED 3 1337 - -
Lapu7g01296 1340 Pfam Protein kinase domain 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01296 1340 SMART arm_5 1244 1298 IPR000225 GO:0005515
Lapu7g01296 1340 SMART arm_5 1204 1243 IPR000225 GO:0005515
Lapu7g01296 1340 SMART arm_5 1120 1160 IPR000225 GO:0005515
Lapu7g01296 1340 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
Lapu7g01296 1340 CDD STKc_STK36 4 256 - -
Lapu7g01296 1340 Gene3D - 1066 1337 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01296 Lapu-Chr7 27737918 27752670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01296 1 245 AGC Kinase Gene Family AT3G08720 38.866 1.67e-46 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Lapu7g01296 Pkinase 5.8e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01296 K06228 - gmx:100792102 2372.82