Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01294 ATGGATGCTTCAAAGTCCTTCGGGAAAAGGTATGAAGATTGCTCGCGTACCACTTCATCTGGCAAAGAATTGAGGGAAGAGTTTGTAAAACGCAGGAAGGTGAATCGAGCATTGGCGATGTTTAGGAACTTGTTTGACAAGCTAGTGCATCAATATGAAGTCTACGAACCTGGGTATTCTAAGGCTAAGACAAAAGCTCTGATGGAAGCAGCAAGGACAATGAGAAGAGAACATCGATGCGAGAACACTCAAAAGTGTGTGGGACATATACTAGGAATCGAGGTTGGAGATGTTTTTCAGTACTGGGCTGAACTCAATGTCATTGGTCTCCATCGACAGTTTTGGAATGGGATTGATTATAAGGGAATGGGCAACAGCTCGTTGGCCACAAGCATTGTTGTAACAGATCGCTATGATAATGCTAGGAAATCCAATGGTACCTTAGTTTATGAAGGTCAAGGAGGAAATCCTTCTGTAGGGAAAAATCTTCCACTTCGTGATCAAAAGTTGGAAGGAGGAAATTTGGCGTTGAAAAATAGCATGCAAGCTAGAAGTCCCGTGAGGGTTATATTGAAAGTTTGTAGAGAATTTGATGGTGCATTCAGATGCACTAGCAGCAGAAATTCTCATTACTCGTATGTTTATGATGGTTTGTATTTAGTGGAAACAATGAAAATAGAAAGAGGGAGATTTGGAAAGCTTGTGTTCAAGTTTTTACTACATAGAATTTTGGGACAACCGGAAACTTGTGTTGCCCTTAAGGACCATGGCCAAAATTCAAGGCAACTTGCAAGTTTTATTTTTAGGAAGAGACACAAACCTAAAGATTCTGCCCTTGAAAAAGAGGTTGTTCGAGTTAATGATCTTTCAAATGGTCGGGAGAAGTTTACTATTCGGGTGGTGACATCAAGCAACTGTGTTCAGCTACCCACACCCTTTGATTATGTTGTAAATAACATTTACTCAATGAAGTTGAAACAGGCAATTCTTTGTGGATGTGATTGTGCGGATGGGTGTGTTGACAAAGAGAATTGCCTTTGCTTGAGGAAGAATGATAGGAAAATGCCCAATGGTTGTAACATAAGACTTGCTTCTGCAAAGGAATCATCACTTATATATGAGTGTGGCCCATCTTGCAAGTGCTCCTCTTCTTGCATCAACCGAGTAAGTCAGCATGGTATTCAGTTTCAACTAGAAATCTTCATGACAGAACAGAAAGGTTGGGGTGTTAGAACGCGCTCTTTCATTCCCTCTGGAAGATTTGTATGTGAGTATGTCGGAGAAGTCAGTGACATTAAGGAGGCTACATGGAGGATAGATAATGACTATATATTTCACATGGGTTTTGGAAATGTCTTCATTAATGCAAGTAAATGTGGAAACGTTGGAAGATTTATAAATCATAGTTGTTGTCCAAATCTCCATGTCAAAGATATTATGTATGATCACAATGACAGCAATCTCCCTCACAAAATGTTGTTTGCTTTAAAGGACATTCCTGCTGGTAGAGAGTTGAGTTATGATTATAATTCCTTCAATGGAAAGTTTATCAAGTGTAGGAGTAATAGCTGCCACTGTGGATCAAAGGAATGCAATGGACAGATCTACATTTAA 1614 0.3965 MDASKSFGKRYEDCSRTTSSGKELREEFVKRRKVNRALAMFRNLFDKLVHQYEVYEPGYSKAKTKALMEAARTMRREHRCENTQKCVGHILGIEVGDVFQYWAELNVIGLHRQFWNGIDYKGMGNSSLATSIVVTDRYDNARKSNGTLVYEGQGGNPSVGKNLPLRDQKLEGGNLALKNSMQARSPVRVILKVCREFDGAFRCTSSRNSHYSYVYDGLYLVETMKIERGRFGKLVFKFLLHRILGQPETCVALKDHGQNSRQLASFIFRKRHKPKDSALEKEVVRVNDLSNGREKFTIRVVTSSNCVQLPTPFDYVVNNIYSMKLKQAILCGCDCADGCVDKENCLCLRKNDRKMPNGCNIRLASAKESSLIYECGPSCKCSSSCINRVSQHGIQFQLEIFMTEQKGWGVRTRSFIPSGRFVCEYVGEVSDIKEATWRIDNDYIFHMGFGNVFINASKCGNVGRFINHSCCPNLHVKDIMYDHNDSNLPHKMLFALKDIPAGRELSYDYNSFNGKFIKCRSNSCHCGSKECNGQIYI* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01294 537 SUPERFAMILY PUA domain-like 70 253 IPR015947 -
Lapu7g01294 537 Gene3D - 69 265 IPR036987 -
Lapu7g01294 537 Pfam Pre-SET motif 290 388 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Lapu7g01294 537 Gene3D SET domain 266 519 IPR046341 -
Lapu7g01294 537 SMART set_7 396 516 IPR001214 GO:0005515
Lapu7g01294 537 SUPERFAMILY SET domain 275 518 IPR046341 -
Lapu7g01294 537 ProSiteProfiles Pre-SET domain profile. 331 393 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Lapu7g01294 537 ProSiteProfiles SET domain profile. 396 510 IPR001214 GO:0005515
Lapu7g01294 537 SMART G9a_1 83 246 IPR003105 -
Lapu7g01294 537 Pfam SET domain 407 510 IPR001214 GO:0005515
Lapu7g01294 537 ProSiteProfiles Post-SET domain profile. 520 536 IPR003616 -
Lapu7g01294 537 SMART preset_2 286 380 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Lapu7g01294 537 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 28 530 - -
Lapu7g01294 537 ProSiteProfiles YDG domain profile. 88 242 IPR003105 -
Lapu7g01294 537 Pfam SAD/SRA domain 87 246 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01294 Lapu-Chr7 27673281 27674967 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01294 66 533 Su(var)3-9 homologs AT1G73100 34.638 8.44e-78 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lapu7g01294 SAD_SRA 1.2e-38 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01294 - K11420 vun:114192587 877.47