Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01256 ATGGCAGAAGATATGAAAATTGATCAAATTGTGGAAGTTCCTGATACCCCAGATAGAATAACTGTGAGGGGTGATGATCAGAAACGTTTATGTAATCCTGAGAAGAGGGGCAGAGCTTTTAATGCTGCAGTTGAAATGAATAATAGTATCTGTACCACATTGTCCCCATCAGAGAAGTCTTATCCTTCTCAAAATCCTCCCATCTTTAGGAGAGGCCAAACAACACATTCTAATGGCGCTGAAAAGATGGAGAAAGGGAAGGGTATAAGCTCCAAGGTTTCTTCTAAATCATCTCACTGTGGTGTTTCTGTTTTAGATTTGACTGAAGAGAATGGACAATGCCAACAACTCAAACCAGCTTTCTCACTTGGTGCATCAAGAAATCATGCAACTGAAGACAAGAAAGCACCCAAAGCAGCCGTCAGGAACTCTTTGTTGCCTGTTATTTCGGATTCTTCTGTTACATCTAGAAATACATCTGTGGACCGTGGCAAGGGTATTTCTCTGTCTAATGATTCTCAATCCCAAAATGGAAAGCGAGTGGCTTTGCCTCCATTTGTTTCCACCTCTCCCCGAGGTAGAGGGCACAAGAGGTTGGTGCGAAATGGGTGCATTTTACCTTTTAATATTGCAACGAGGGAAAAACAATTAGCTGAACAGAAAAACCTTAGAACAGAAGATGTTGCACAGAGCCATGCTGATCATGCGGTTTCTAGCAATACAGTGTCACCAAATAGTGTTGATGTTAGAGTTAAAGGAAAGGAAGTGCTTATTCCTCCTCCCTTCAATGGACACAATGATGGAACTTTTTGCACGGCTAGCAGGAGCCCTGTGATCAATTCTGAAGAGGCCAATGGTACTGGTAATGATACAAGACATTCACTTCAGTACACTGGGGGACAAGGTCGATGGAGAACTACTCATAGTGAGAGGAATGCTAATCAGCACTTGTATGATGTACATGAGCATCATTTGACGAGAAATAATGGTGTTGGAAGATTTATTAATGGACGGAATACATGCATATTGGATAGAAGAAACATTGGGAGTGATCATAGCAGCACACATGTACAGGGTTCTCAATCAGATCATACCGCTCAACCAAGTGCTGTGATCATTCCGGATGTGGACCAGTCGTCTGTTAACCGTCCTACTGCTAACATTCTGACTAAAAGGCAAAGAAAACGTGAATCACTTAGGGAATCATCAAGTTCATATCCGGAAGTGGTAGAGTTGTCATCCACACCAAGGAACTCAGCAAGCTCATCCCATAGCCATGTCTTGGATCCTGAAGTGGTTGAGTTGTTGGATCCTGAAGTGGTTGAGTTGTTATCCACACCAAGCTATAGATCATCTGAAGATTTAGATGCTAATGACAATAGTAGCATGGAAGCTCGGGCAAGACAAGTGGAAGCAGATGAGATATTGGCACGTGAACTTCAAGAACAATTGTATCATGATGATTCTATTGAAGACAGAGGGATTGATGAACATTTAGCGTGGGAGTTGCAACATGCAGAGGATCTTCTGCCTACTTCTATTGAGAGTCACAACATAAATCATCCTACACGGATTCCCAGGGCAAACAGACAGCCTCGTATATGGCCTAATCCGAATTCTTCTAGAAGGAGAGCTATGCCTCCAGTTTCTTTCTCTAATAGAATGTCACAGTTGAGGAGTCGTGCTACAAGTAGGACTAGGACACCTAACATGCCATCTAGAGGAAGAAGCCCCCAGTTTCCTCTGCATATGGACTTGGACATGAGACTTGATATATTGGAAGCTTTAGAGAATTCAATGGGGGATTTCAGTGATATGGGAATGGCTGATGGCATCTTTAATGCACGACGGGATTTCAACGAAAGTGATTATGAAATGTTATTGGCCCTTGATGAGATAAATCACCAACATACTGGTGCGTCCACCAATCTGATCAATAGCCTTCCGCAGTCCACCATCCAGAATGACATGACAGAGCCATGTGCTGTATGTCTTGAGACCCCGACCAGGGGAGAAGTTATTCGCCACCTTCCCTGTTTGCACAAATTTCACAAAGATTGTATCGATCCTTGGCTCCAGAGGAAAACAACATGCCCCGTGTGCAAGTCATCAATCACCTAA 2121 0.4309 MAEDMKIDQIVEVPDTPDRITVRGDDQKRLCNPEKRGRAFNAAVEMNNSICTTLSPSEKSYPSQNPPIFRRGQTTHSNGAEKMEKGKGISSKVSSKSSHCGVSVLDLTEENGQCQQLKPAFSLGASRNHATEDKKAPKAAVRNSLLPVISDSSVTSRNTSVDRGKGISLSNDSQSQNGKRVALPPFVSTSPRGRGHKRLVRNGCILPFNIATREKQLAEQKNLRTEDVAQSHADHAVSSNTVSPNSVDVRVKGKEVLIPPPFNGHNDGTFCTASRSPVINSEEANGTGNDTRHSLQYTGGQGRWRTTHSERNANQHLYDVHEHHLTRNNGVGRFINGRNTCILDRRNIGSDHSSTHVQGSQSDHTAQPSAVIIPDVDQSSVNRPTANILTKRQRKRESLRESSSSYPEVVELSSTPRNSASSSHSHVLDPEVVELLDPEVVELLSTPSYRSSEDLDANDNSSMEARARQVEADEILARELQEQLYHDDSIEDRGIDEHLAWELQHAEDLLPTSIESHNINHPTRIPRANRQPRIWPNPNSSRRRAMPPVSFSNRMSQLRSRATSRTRTPNMPSRGRSPQFPLHMDLDMRLDILEALENSMGDFSDMGMADGIFNARRDFNESDYEMLLALDEINHQHTGASTNLINSLPQSTIQNDMTEPCAVCLETPTRGEVIRHLPCLHKFHKDCIDPWLQRKTTCPVCKSSIT* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01256 706 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 629 706 IPR013083 -
Lapu7g01256 706 Pfam Ring finger domain 661 702 IPR001841 -
Lapu7g01256 706 MobiDBLite consensus disorder prediction 403 426 - -
Lapu7g01256 706 ProSiteProfiles Zinc finger RING-type profile. 661 702 IPR001841 -
Lapu7g01256 706 MobiDBLite consensus disorder prediction 351 426 - -
Lapu7g01256 706 SUPERFAMILY RING/U-box 654 705 - -
Lapu7g01256 706 FunFam RING/U-box superfamily protein 627 706 - -
Lapu7g01256 706 PANTHER SI:CH211-59O9.10 357 706 - -
Lapu7g01256 706 MobiDBLite consensus disorder prediction 533 575 - -
Lapu7g01256 706 SMART ring_2 661 701 IPR001841 -
Lapu7g01256 706 MobiDBLite consensus disorder prediction 521 581 - -
Lapu7g01256 706 MobiDBLite consensus disorder prediction 55 76 - -
Lapu7g01256 706 MobiDBLite consensus disorder prediction 351 388 - -
Lapu7g01256 706 MobiDBLite consensus disorder prediction 153 183 - -
Lapu7g01256 706 CDD RING-H2_PA-TM-RING 660 702 - -
Lapu7g01256 706 MobiDBLite consensus disorder prediction 55 95 - -
Lapu7g01256 706 MobiDBLite consensus disorder prediction 153 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01256 Lapu-Chr7 26789822 26798968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01256 3 706 C3H Transcription Factor Family AT1G04790 31.327 1.43e-63 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01256 - - gmx:100796218 889.412