Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01250 ATGGACCTAGATGATATGGACATGGATATTCCGCTCCCTGAAGAACTCGAGTTTCTCGAATCAAATTCTCATGCTCCCGAGCAAAATCAAGAAGAAGAAGACCATCATTATTACTTCCCAGACCTCGATCTCCCCACCGAATCGCACTCTCCACCACTGCCGCCAGATCTTGCGGCTCCTTCGGGGGAAATCGAATCCAACGGTCACAAGCGGTCGCGTCCGAGTTCACCTCCCGAAGAGAAGAGAGCGAAGGTTAGGGTTGCCGTCGAGGAGGATTCCTCCACCGCGGCCGCCGATGAGGACTGGCTTCGCTACTCTCCTCCGCCGCAGGAGCCAGCGGTTCAGGAAACCACGTTCGTGCAGGAGAAGACCTTGTCGAGGTTCGCCTCGGAGATTGACGGCGAGTGCATGCCAATCACCGCGCCCAACGGCGACAGGGTTTACGCGAAGCTGATCCGGTTTGAAGGAGAAGAGCGCGTGAAGAAGCTCGATTGCAATGGATTTTCTGCTGAGCTTAGTTCAGAACCAATTAATGTTATGCTTGAGAGGATGGAGCAAGAGGCTTTTGCTAAGGCCTTGGAAGCTAGTTCTGAAGGTCAGAGGGTTCCAGATGTTCCTGAAGCAGAAATGGTTAATGAGCGACTTTGGGTTGATAAGTATGCACCGAAATCCTTTACCGAGCTTCTCAGTGATGAACAGACAAATCGTGAGGTACTGTTGTGGTTGAAGCAATGGGATTCTGTTGTGTTTGGATCTGAAATTCGAAGCACATCAGATGATGTTTTGTCTGCTTTGAAACGACATTCTTCCATTGTCCACAATCAGAAACCTTTGAATACAAAGTTTCCTAGGAAGAATGGAGGACACAAATGGAGTAATGGGGGGAGGTACACAAATTCTGTAAGTATTGATGAAAGTGGTAGTTCAAAGAGTATTCAAGATGTTTGGCATATGAAGTCAAGGAATATTGGTCCACCAGAACAAAAGATCCTTCTACTATGTGGACCACCAGGTCTTGGAAAAACAACACTAGCACATGTAGCTGCTAGGCATTGTGGATATCATGTGGTCGAGATTAATGCTAGTGATGATCGTTCTACTTCAACAATTGAAGCCAAGATCCTTGATGTGGTTCAAATGAACTCTGTATTGTCTGATTCAAGGCCAAAGTGTTTGGTGGTGGATGAAATTGATGGAGCTCTTGGTGATGGTAAGGGTGCTATCGAGGTTCTTCTAAAGATGATTTCTGCCGAAAGGAAGCCAGATGTGAGGAAACAAACTTTGGGCAAAGAACAACTGGAAAGGAAGTCGTCAAAAAAGGGTTCGAAAACTGCATCACTTTCAAGACCAGTGATTTGCATTTGTAATGACCTATATGCACCTGCCTTAAGACAATTACGTCAGGTAGCCAAGGTTCATATATTTGTTCAACCAACAGTTAGTCGTGCAGTGAGCAGGCTGACATACATATGTAACAAGGAGGGAATGAAAGCAAGTGCAATTGCACTCACTGCTCTAGCAGAATATACGGGATGTGATATTAGATCATGCTTGAACACTCTCCAATTTCTCTCCAAGAAGAAAGAAGCCCTCAATGTGTTTGATATTGGTTCTCAAGTAGTTGGCCAGAAGGACACGTCAAAGAATGTTCTAGACATCTGGAAAGAGATTTTCCATAAGCGAAGAACAAAAAAGATGGAAAGAAAATCTCATAGAGGGAATTCCTTTGAATTTGACTCATTGTACTCCCTTGTGTCTAAACGAGGTGATAGTGACTTGATTCTGGATGGAATTCATGAAAATCTTTTGGGGCTCAATTATCATGACCCGGTGATGCATAAAACTGTCAAGTGCTTCAACAATCTTGGAGTTTATGATCTGTTGCATCAATATATGATGAATACACATCAGATGACGCTTTATGTTTATTTGCCCCTAGTTGCAATTACTGTACATCATGTAGTATCTCAAGTTCAGAAACCAAACATTGAGTGGCCAAAGTCACATCAGAGATATCGTACAATGATGATGGAAAAGATGGATATTTTGAATACCTGGCACCACAGAATCCCGCCGCAGATTGCAAGGCACTTATCAGCTAGTTCCTTTGTAGAAGACTTAATTTCTCCGTTGTTACACATTCTGTCCCCACCAACTATAAGACCGGTGGCATTACAATTACTATCTGATAAGGAGAAGAATGATCTTGCTCAATTAGTTAGCAAAATGTTATCATACACTATAACGTATAAGACTGTGAAATCAAATATATTGCCTCAATCCCAGAAGTTTGAAGTAGCAGATGGTTTGTCTGTGTCTCTTGTTCCTCCTATCAGTGACTTTATAAACTTCAAGGATTATACTTCAAACCATTATGTGCTTTCTGTAGCTATGAAGCAGGTTTTGGCACATGAGGTTGAAAAGCATAAGATTTTACAAGTTGGTATCGACAAAAATGGGGCTTTAGCAAATGAAGGGCATGAAGTCATTGAGACTGGAACTCACAACATCCCATTAGCCAATACCAATTATGCAACTACAGTTGATATGAAAGCTAATGAAAATCGGGTTAATTTTGCACCGAGGAAATTAAATGCAAATCCCACAATAGTTTCATCAAACTTGAATATAGATAAAAGTTCAAGTGGAACAGATAGTGGGAAACTGCCAAACATGGGAAATATGAAAAAACCATCCAGAAGTTCCTCCAGTTTCTTTGACAGGTTTAAAAAGGTAAATATTAAGGGCTTACAAAGTAATGACAGATCTCTACCGGAAGAAGCTACCTTGGAGAAAGATCGATACCCTTTACTTTTTAAATATAACGAGGGCTTTACTAATGCAGTCAAAAGGCCAGTCCGTATTCGTGAATTTCTATCTTGA 2883 0.4214 MDLDDMDMDIPLPEELEFLESNSHAPEQNQEEEDHHYYFPDLDLPTESHSPPLPPDLAAPSGEIESNGHKRSRPSSPPEEKRAKVRVAVEEDSSTAAADEDWLRYSPPPQEPAVQETTFVQEKTLSRFASEIDGECMPITAPNGDRVYAKLIRFEGEERVKKLDCNGFSAELSSEPINVMLERMEQEAFAKALEASSEGQRVPDVPEAEMVNERLWVDKYAPKSFTELLSDEQTNREVLLWLKQWDSVVFGSEIRSTSDDVLSALKRHSSIVHNQKPLNTKFPRKNGGHKWSNGGRYTNSVSIDESGSSKSIQDVWHMKSRNIGPPEQKILLLCGPPGLGKTTLAHVAARHCGYHVVEINASDDRSTSTIEAKILDVVQMNSVLSDSRPKCLVVDEIDGALGDGKGAIEVLLKMISAERKPDVRKQTLGKEQLERKSSKKGSKTASLSRPVICICNDLYAPALRQLRQVAKVHIFVQPTVSRAVSRLTYICNKEGMKASAIALTALAEYTGCDIRSCLNTLQFLSKKKEALNVFDIGSQVVGQKDTSKNVLDIWKEIFHKRRTKKMERKSHRGNSFEFDSLYSLVSKRGDSDLILDGIHENLLGLNYHDPVMHKTVKCFNNLGVYDLLHQYMMNTHQMTLYVYLPLVAITVHHVVSQVQKPNIEWPKSHQRYRTMMMEKMDILNTWHHRIPPQIARHLSASSFVEDLISPLLHILSPPTIRPVALQLLSDKEKNDLAQLVSKMLSYTITYKTVKSNILPQSQKFEVADGLSVSLVPPISDFINFKDYTSNHYVLSVAMKQVLAHEVEKHKILQVGIDKNGALANEGHEVIETGTHNIPLANTNYATTVDMKANENRVNFAPRKLNANPTIVSSNLNIDKSSSGTDSGKLPNMGNMKKPSRSSSSFFDRFKKVNIKGLQSNDRSLPEEATLEKDRYPLLFKYNEGFTNAVKRPVRIREFLS* 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01250 960 Gene3D - 478 548 - -
Lapu7g01250 960 Pfam ATPase family associated with various cellular activities (AAA) 331 457 IPR003959 GO:0005524|GO:0016887
Lapu7g01250 960 MobiDBLite consensus disorder prediction 1 116 - -
Lapu7g01250 960 MobiDBLite consensus disorder prediction 277 305 - -
Lapu7g01250 960 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 6 959 - -
Lapu7g01250 960 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 214 526 IPR027417 -
Lapu7g01250 960 MobiDBLite consensus disorder prediction 26 42 - -
Lapu7g01250 960 CDD AAA 326 429 - -
Lapu7g01250 960 MobiDBLite consensus disorder prediction 874 903 - -
Lapu7g01250 960 MobiDBLite consensus disorder prediction 66 89 - -
Lapu7g01250 960 Gene3D - 213 476 IPR027417 -
Lapu7g01250 960 FunFam Chromosome transmission fidelity protein 18 478 545 - -
Lapu7g01250 960 CDD HLD_clamp_RFC 478 536 - -
Lapu7g01250 960 SMART AAA_5 327 481 IPR003593 GO:0016887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01250 328 541 Core DNA Replication Machinery Family AT5G22010 28.384 1.06e-13 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01250 K11269 - gmx:100785041 1603.96