Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01249 ATGGAACTTGTTGCTGGACCTTTAATGGGAGCTGTTTTCAACGTGTTGCTTGAAAAGATACTTTCCACTGAGGTTGTCAACTTCTTCAAGAAGAAAAACTGTGAGAAGTTGCTCAAAAGGTTGAAGATCATCTTGTTGTCTGTCAATGTTGTTCTCAATGATGCTGAGGAAAAGCAAATGAAAAATGAAGCAGTGAAGGAGTGGCTTGAGGAACTCAAAGATGTGGCCTTTGCTACTGAGGACCTACTTGATGAGATCTACACTGATGCAAAGATCAATGCAAAAGAGGTAAACACACTCCACTCCCTTCCTATGAGTTTTTATAGTAAAGGGCTTGAAGAGAAAATTGAAGATGTTCATGAGAGATTAGAGTTTATTATAAGACAGAAAGAAGTGCTTGATCTCAAGGCGGGTCAGGAAGTCAAAATGGCACACAAGACTCCAACCTCATCTGTGATGGAAGCATGTGATGTGTACGGAAGGGATAATGATAAAGAATCCTTAGTTAACTTGGTATTGACTCATGATGAGAAAATAGGTGTTATTCCCATTGTTGGAATGGGTGGAATTGGAAAAACCACCTTAGCTCAACTGGTATACAATGATCAAAGAGTGCAGAAGGAGTTTGATCTCAAAGCCTGGATTTATGTCTCTGAAGAATTTGACATTTGTAAGATTACAAAAACCCTTTTGGAGGCTGTCACGTCTTGTAGTTGTGACATTGAAGATTTAAATTTTCTCCAGAGGGATCTCAAAATGCATACAATGAAGAAAAAGTTTTTGTTTGTGTTGGATGACGTGTGGAACGAAAATTATGACAATTGGGACAAGTTCAGGAGTCCAATTAAGCATGCAGGGGCACATGGAAGTAAGATTATTGTAACTACTCGAAGTGGGCATGTTGCATCCATCATGCAGACTGTTTCACCCTATAATCTCAGTAAATTATCCAATGAGGATTCCTGGAATTTATTTTCGAAACACGCATTTGATTATGGTGACTCAAGTTTGCAATTGCATCGAAGTTTAGACAAAGTTGGGAGAGAAATAGTGAGGAAGTGCAAAGGGTTGCCTTTGGCTGTGAAGACACTTGCAGGACTCTTGAGGTCTAAAAGTGATAGACAAGAATGGTGCAAAGTACTGAACAGTGAGATATGGGATTTGCAAGATTCTGAGAGTAACATTCTTCCGGCTTTGAGATTAAGCTACCGTTATCTCCCTTCACATTTGAAGAGATGCTTTGCTTATTGTGCAATTTTCCCAAAAGATTATGAATTCGAAAAGGAGAACCTGGTTTTGTTGTGGATGGCAGAAGGTTTTCTCCAACAATCCAAAAGGCATAGAAGAATTGAAGAAGTTGGAAATGAGTACTTTTGTGAACTAGTATCTAGATCATTTTTCCAGCAATCAAGGCGTGGCAAGTCATGTTTTCTAATGCATCACCTTGTAAATGATTTGGCTCAATTTGTGTCAGGAACATTTTCTATCAGAATGGAATGTAGCAATTCTAATGAAATCAAAGAAAGAACTCGCCATTTGTCACACATTATTGCAGATAGTTCCTCATATGTAAGCCTGAAAGATGTTAGCAAAGCAAATTGCTTACGCACTTTTCTGCAAATAAGACCAATAGGTACATCCATTGACTTGTTCTACAGCATGCCAAATGATCTGTTAACAAAGTTAAGGTGCTTAAGGGTGTTATCTTTGGTAGGAACACATATCTATGGCTTACCTAATTCAATAGGCGAACTAAAACATCTCCGCTATCTGCAAGTGGCTGACACTGAGATTGTGAGGTTACCTGAATCCATCTGCAGCTTGTTCAATTTACAAACTCTCAAGTTAGTTGGATGTCACAATCTCATTGAACTACCAGCAGGTATTCATAAGCTTGTTAACTTGCGCCACTTGGATGTTAGAGGAACACGTTTAAGGTGGATGCCATTGCAAATCAATGAGTTAATCAGCCTCCAAAATTTGAGTGACTTTTTTGTGGGAAAAGGGTATGGATCTTCCATCGGTGAGTTGGCTGAGCTATCGTGTTTACATGGAGAATTGTTCATTCATTACATTGAACATATTGCTAATGACAAGGATTGTGAAATGGCAAAGTTGAAGGAAAAGTGTGGTCTTGAAAAGTTGTCTTTGGAATGGTGTGGGAATGGTGAAACTGATGACTCCCAGAAAGAAAAAATCATACTGAACAACCTGAAACCACATACAAATTTGAAGAAGCTAGATATCTATGACTATCCAGGAACAGAATTTCCAGATTGGTTGGGGGATCACTCCTTCTACAACTTGGTGTCCTTACTGCTCAAGGGCTGTAAATATTGCTACAAGTTGCCTCCCCTTGGACAACTTCCAATGTTGAAAGTGCTTCAGATTAGTAAATTTGAGGGACTAGTGAGTGTGGGATCTGAGTTTCTTGGAAATAGAACCTCTTCTGTAATTGATTCCTTTCCAGCACTAGAAATTCTAAGGATTGAGCATATGCCATTATGGGAGAAATGGTATGCCAATGCTGAAAATGCAGGAAACAAAGCTTTCTTTCATCTTAGAGAGTTTCATATTGGAAACTGTCCCAAACTGAGGGGGGATTTACCAGATAACCTTCCATCTTTGACATTATTTGTAATCAGAGATTGTAAAAGTTTACTTTGTTCTCTTCCTAATTCTCCAGCTCTGCGTGTATTGAACATTCAGAATTGTGAGAGTCTAGAATTCCCAGTACAAGCACCTCGGTGCCACCAATCACTCACATCTTTGTTCTTGCATGGTAGCTGTGACTCACTAGTGTTCTTGCCTTTAGATATCTTCCCCAACATCAAGTCTTTAGATATTTGGGGATGTAAAAATCTTGAAGCACTTACTGTTTCAGAATCAGATGAAACCCGTCCAAGTTTCAAGTCCCTCCATTCCATGCGCATAAGGCATTGTCCAAATTTCACATCATTTCCAAAGGGTGGATTTGCAGCATCAAAACTCACTTTGTTAACCATCAACTACTGTGAGAAGTTGAATTCTCTGCCTGAACAAATGCATGACTTTATGCCAAGTTTGAAGGAAGTTCAACTTAGGGGATGTCCCAAAATTGAGTCATCAACTATGAGGCCACTCAGGATCCGGATTTGCAGCAAACTCATGGAAGGGAAACAAAACCACTCTGATCCTCTCTTTGCAAGGTTGAAGGGTTTGGTCATTGATGAAAGCCCCTCATCAAGTTAG 3231 0.3937 MELVAGPLMGAVFNVLLEKILSTEVVNFFKKKNCEKLLKRLKIILLSVNVVLNDAEEKQMKNEAVKEWLEELKDVAFATEDLLDEIYTDAKINAKEVNTLHSLPMSFYSKGLEEKIEDVHERLEFIIRQKEVLDLKAGQEVKMAHKTPTSSVMEACDVYGRDNDKESLVNLVLTHDEKIGVIPIVGMGGIGKTTLAQLVYNDQRVQKEFDLKAWIYVSEEFDICKITKTLLEAVTSCSCDIEDLNFLQRDLKMHTMKKKFLFVLDDVWNENYDNWDKFRSPIKHAGAHGSKIIVTTRSGHVASIMQTVSPYNLSKLSNEDSWNLFSKHAFDYGDSSLQLHRSLDKVGREIVRKCKGLPLAVKTLAGLLRSKSDRQEWCKVLNSEIWDLQDSESNILPALRLSYRYLPSHLKRCFAYCAIFPKDYEFEKENLVLLWMAEGFLQQSKRHRRIEEVGNEYFCELVSRSFFQQSRRGKSCFLMHHLVNDLAQFVSGTFSIRMECSNSNEIKERTRHLSHIIADSSSYVSLKDVSKANCLRTFLQIRPIGTSIDLFYSMPNDLLTKLRCLRVLSLVGTHIYGLPNSIGELKHLRYLQVADTEIVRLPESICSLFNLQTLKLVGCHNLIELPAGIHKLVNLRHLDVRGTRLRWMPLQINELISLQNLSDFFVGKGYGSSIGELAELSCLHGELFIHYIEHIANDKDCEMAKLKEKCGLEKLSLEWCGNGETDDSQKEKIILNNLKPHTNLKKLDIYDYPGTEFPDWLGDHSFYNLVSLLLKGCKYCYKLPPLGQLPMLKVLQISKFEGLVSVGSEFLGNRTSSVIDSFPALEILRIEHMPLWEKWYANAENAGNKAFFHLREFHIGNCPKLRGDLPDNLPSLTLFVIRDCKSLLCSLPNSPALRVLNIQNCESLEFPVQAPRCHQSLTSLFLHGSCDSLVFLPLDIFPNIKSLDIWGCKNLEALTVSESDETRPSFKSLHSMRIRHCPNFTSFPKGGFAASKLTLLTINYCEKLNSLPEQMHDFMPSLKEVQLRGCPKIESSTMRPLRIRICSKLMEGKQNHSDPLFARLKGLVIDESPSSS* 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01249 1076 Coils Coil 109 129 - -
Lapu7g01249 1076 Gene3D Ribonuclease Inhibitor 530 883 IPR032675 -
Lapu7g01249 1076 FunFam Probable disease resistance protein At1g63360 403 489 - -
Lapu7g01249 1076 PRINTS Disease resistance protein signature 181 196 - -
Lapu7g01249 1076 PRINTS Disease resistance protein signature 892 908 - -
Lapu7g01249 1076 PRINTS Disease resistance protein signature 354 368 - -
Lapu7g01249 1076 PRINTS Disease resistance protein signature 254 268 - -
Lapu7g01249 1076 Gene3D - 315 401 IPR042197 -
Lapu7g01249 1076 FunFam Probable disease resistance protein At1g61300 141 310 - -
Lapu7g01249 1076 Gene3D - 12 122 - -
Lapu7g01249 1076 PANTHER DISEASE RESISTANCE PROTEIN RP 44 946 IPR044974 GO:0006952
Lapu7g01249 1076 Pfam NB-ARC domain 167 403 IPR002182 GO:0043531
Lapu7g01249 1076 Pfam Rx N-terminal domain 10 90 IPR041118 -
Lapu7g01249 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 417 IPR027417 -
Lapu7g01249 1076 SUPERFAMILY L domain-like 561 991 - -
Lapu7g01249 1076 Gene3D - 139 309 IPR027417 -
Lapu7g01249 1076 Gene3D Ribonuclease Inhibitor 884 1051 IPR032675 -
Lapu7g01249 1076 Gene3D - 402 489 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01249 Lapu-Chr7 26654596 26657826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01249 153 798 WRKY Transcription Factor Family AT5G45050 23.589 7.35e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01249 - - vum:124831962 1970.67