Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01209 ATGATGGACAAGCATGCAACATTTTCAGTGTCACTTGTGAGTGTCACAGAAATTGGAAGAAAATATTTTATCCAAGAACAAACTTGGAACCCTTGTTGCATGTATTGGGGAGAAGTTATGGCTGGCCATATGGGTCGGGGTGTGATGGAGGAGGAGGTATGGAGGAAGGGACCTTGGACTGCTGAAGAGGACAGGTTGCTTGTTGAGTATGTCAGGCTGCATGGTGAAGGAAGATGGAACTCTGTTTCTAGGCTTGCAGGATTGAAAAGAAATGGGAAGAGCTGCAGATTGAGGTGGGTGAATTATCTGAGGCCTGACCTGAAAAGGGGACAGATAACACCACAAGAAGAGAGCATAATTCTAGAGTTGCATGCCAGGTGGGGAAACAGGTGGTCAACAATTGCAAGGAGTTTACCAGGGAGAACTGACAATGAGATAAAAAACTATTGGAGGACTCATTTCAAGAAAAAGGCTAAGAGTCCCTCTGATGCAGCGGAAAAGGCAAGAAATAGACTCCTGAGGAAGCAGCAATTTCACCAGCAACAACAGCAACAGTTGCAGCAGCAGCAACAGTATCAGGCACAACAACAACTACAATTCAACTTTGACATGAAAGGCCTCATGGCCTTGCTTGAGGACAACACACACAGAGCACCTTATATATCTCAATCTAGACAAGAAATGGTCAACATGCAGCAAAACACCCCAGAAGAGCAAGGATTCTTGTACTCTATATTGAATGGTCACCCTTCTGCACCAGAGACCTCAGCTGAAGAAATTTTGTGGGATGGTCTGTGGAACTTGGATGATGCTCATGGCAATTTCAGTGTAGCTAGTGCAGCAAGCAAAGTTGGTCTATACAATTTAGTTGCTCCCTTCTGTTAA 885 0.4463 MMDKHATFSVSLVSVTEIGRKYFIQEQTWNPCCMYWGEVMAGHMGRGVMEEEVWRKGPWTAEEDRLLVEYVRLHGEGRWNSVSRLAGLKRNGKSCRLRWVNYLRPDLKRGQITPQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKSPSDAAEKARNRLLRKQQFHQQQQQQLQQQQQYQAQQQLQFNFDMKGLMALLEDNTHRAPYISQSRQEMVNMQQNTPEEQGFLYSILNGHPSAPETSAEEILWDGLWNLDDAHGNFSVASAASKVGLYNLVAPFC* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01209 294 FunFam Myb transcription factor 56 108 - -
Lapu7g01209 294 SMART sant 55 105 IPR001005 -
Lapu7g01209 294 SMART sant 108 156 IPR001005 -
Lapu7g01209 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 104 158 IPR017930 -
Lapu7g01209 294 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 49 234 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lapu7g01209 294 ProSiteProfiles Myb-like domain profile. 55 103 IPR001005 -
Lapu7g01209 294 Gene3D - 113 157 - -
Lapu7g01209 294 CDD SANT 58 103 IPR001005 -
Lapu7g01209 294 CDD SANT 113 154 IPR001005 -
Lapu7g01209 294 Gene3D - 56 108 - -
Lapu7g01209 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 103 IPR017930 -
Lapu7g01209 294 FunFam MYB transcription factor 113 201 - -
Lapu7g01209 294 ProSiteProfiles Myb-like domain profile. 104 154 IPR001005 -
Lapu7g01209 294 Coils Coil 169 189 - -
Lapu7g01209 294 Pfam Myb-like DNA-binding domain 56 103 IPR001005 -
Lapu7g01209 294 Pfam Myb-like DNA-binding domain 109 153 IPR001005 -
Lapu7g01209 294 SUPERFAMILY Homeodomain-like 55 150 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01209 Lapu-Chr7 25565132 25566734 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01209 49 294 MYB Transcription Factor Family AT4G13480 57.143 9.19e-91 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lapu7g01209 Myb_DNA-binding 2.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01209 K09422 - gmx:100795981 459.914