Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01208 ATGTCGCTGCTAGAGTGTTCCGCCACCCAACTTTCCCAGCTTTTGGGCCCAAACACCACCAACTCTGACGCGGCGGCCAAGCTAATCTGCGACCAGTTCACCGCCGTGGGGCACAAATTCACCGACACAGGCTACGCCATCGACAACACCTACCTTCTCTTCTCCGCGTACCTCGTGTTCTCGATGCAGCTCGGCTTCGCCATGCTCTGCGCGGGCTCCGTCCGGGCGAAGAACACCATGAACATCATGCTCACCAACGTGCTCGACGCCGCCGCGGGCGGCCTCTTCTACTATCTCTTCGGCTTCGCCTTCGCCTTCGGCTCCCCTTCCAACGGCTTCATCGGGAAACACTTCTTCGGCCTCACAGACCTGACCTCCCAGAACTCAACGTTGGACTACAGCAACTTCCTTTACCAGTGGGCTTTCGCCATCGCCGCCGCAGGCATCACCAGCGGCTCCATCGCCGAGCGGACGCAGTTCGTCGCGTACCTAATCTACTCTTCCTTCCTAACCGGCTTCGTCTATCCAGTAGTCTCTCACTGGTTCTGGTCCCCCGACGGTTGGGCATCCGCGCTCAATCAAACCGATCTTTTATTCTCCACCGGCGTAATCGACTTCGCCGGCTCCGGCGTTGTCCACATGGTTGGCGGCGTGGCAGGACTCTGGGGCGCGCTTATCGAGGGTCCCCGAATCGGCCGATTCGATCACGCGGGACGCGCAGTGGCCTTGCGTGGCCACAGTGCCTCGTTAGTGGTGCTCGGAACCTTCATGCTGTGGTTCGGTTGGTACGGGTTCAACCCTGGTTCGTTCAACAAAATCTTGGTCACTTATAATAATAACTCAGGGAGTAACTATGGTCAATGGAGCGCGGTTGGGAGAACCGCGGTCACCACAACTCTAGCAGGATCAACAGCGGCGTTGACCACGCTCTTCGGGAAACGGTTGTTATCTGGTCACTGGAACGTCACCGACGTGTGCAACGGTTTGTTGGGCGGGTTCGCCGCCATAACAGCCGGTTGTTCAGTTGTTGAGCCATGGGCGGCTATCGTGTGCGGTTTTGTGGCGTCCGTTGTTTTGATCGCGTGTAATAAACTGGCGGAGAGGGTTAGGTTTGACGATCCATTAGAGGCGGCGCAGTTGCATGGAGGGTGTGGCGCGTGGGGGGTGATTTTCACGGCGCTGTTCGCGAAGAAGGAGTACGTGTTGGAGGTTTATGGGGGAGAAGCGTCGAGGCCGCACGGGTTGTTTATGGGGGGTGGGGGAAAGTTGTTGGCGGCGCATGTGATTCAGATTTTGGTTATTGTTGGGTGGGTGAGTGCTACCATGGGGCCTCTCTTCTGGGGTCTGAATAAATTGAAGCTGTTGAGGATCTCATCGGAGGATGAACTGGCGGGTATGGATCTGACCCGGCATGGAGGGTTTGCGTACGCTTATGAGGATGATGAGACGCATAAGCACGGGATTCAGTTGAGGAAGGTTGAACCAAACTCATCTACTCCTACCACTGACGACTGA 1515 0.5696 MSLLECSATQLSQLLGPNTTNSDAAAKLICDQFTAVGHKFTDTGYAIDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGSPSNGFIGKHFFGLTDLTSQNSTLDYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSPDGWASALNQTDLLFSTGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHAGRAVALRGHSASLVVLGTFMLWFGWYGFNPGSFNKILVTYNNNSGSNYGQWSAVGRTAVTTTLAGSTAALTTLFGKRLLSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVASVVLIACNKLAERVRFDDPLEAAQLHGGCGAWGVIFTALFAKKEYVLEVYGGEASRPHGLFMGGGGKLLAAHVIQILVIVGWVSATMGPLFWGLNKLKLLRISSEDELAGMDLTRHGGFAYAYEDDETHKHGIQLRKVEPNSSTPTTDD* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01208 504 Pfam Ammonium Transporter Family 51 476 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lapu7g01208 504 SUPERFAMILY Ammonium transporter 46 457 - -
Lapu7g01208 504 ProSitePatterns Ammonium transporters signature. 205 230 IPR018047 GO:0008519|GO:0016020|GO:0072488
Lapu7g01208 504 Gene3D Ammonium transporter AmtB like domains 29 494 IPR029020 -
Lapu7g01208 504 NCBIfam ammonium transporter 48 476 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lapu7g01208 504 PANTHER AMMONIUM TRANSPORTER 20 479 - -
Lapu7g01208 504 FunFam Ammonium transporter 29 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01208 Lapu-Chr7 25477626 25479170 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01208 4 501 Inorganic Solute Cotransporters AT4G13510 80.400 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01208 K03320 - gmx:100818774 875.93