Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01190 ATGAAGGTGGTCGCCGCGTATTTACTCGCCGTCCTCGGAGGCAACGAGAAACCCTCCGCCGCTGTTATCAAGGAAATTCTCGGCTCCGTTGGTGCAGAAGCAGATGATGATAGGATAGAACTATTTTTGTCTGAAATTAAGGGAAAGGACATAGTTGAGGTTATTGCTGCCGGTAGGGAAAAGCTTGCCTCAGTGCCCTCTGGTGGTGGTGCTGTTGCTGTCGCCGCTGCACCTGGTGGAGGTGGTGGCGCTGCTGCTCCTGCCGCTGAGGCTAAGAAAGAGGAAAAAGTCGAGGAGAAAGAGGAATCCGATGATGATATGGGTTTCAGTCTCTTCGATTAA 342 0.5175 MKVVAAYLLAVLGGNEKPSAAVIKEILGSVGAEADDDRIELFLSEIKGKDIVEVIAAGREKLASVPSGGGAVAVAAAPGGGGGAAAPAAEAKKEEKVEEKEESDDDMGFSLFD* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01190 113 Gene3D - 1 59 IPR038716 -
Lapu7g01190 113 FunFam 60S acidic ribosomal protein P2 1 59 - -
Lapu7g01190 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lapu7g01190 113 CDD Ribosomal_P2 1 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lapu7g01190 113 Hamap 50S ribosomal protein L12 [rpl12]. 2 113 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lapu7g01190 113 MobiDBLite consensus disorder prediction 76 113 - -
Lapu7g01190 113 Pfam 60s Acidic ribosomal protein 18 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01190 Lapu-Chr7 25008706 25011383 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01190 1 113 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 69.027 4.69e-30 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01190 K02943 - gmx:100499761 126.331