LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu7g01188	ATGGGAGAGCTGCCAGTGGCAACAGTATATGCTCCAGAAGATCATCACCACAATTTGCTGGCTACTGCCATGGGAGACCAACAATTAGCCAGAGAATCCAAAATACACAGCTATGGAAAGAGCTTCAATGGATTTGTTGCAAGACTTTTGTCTCATGAAGCAGAGAAATTAATAGAAGAGGAAAATGTGGTATCTATTTTTCCAAATACATATAACAAATTACACACCACAAGGTCATGGAATTTTCTAGGCTTACCCTTAAAAAGGAACAGACACTCTAGTGTGGAGAGTGATATGATTGTTGGTGTGTTTGACACAGGAATTTCCCTTGATTGTCCCAGTTTCAATGATTCTGGGTATGGGCCTCCCCCACCAGCTTGGAAGGGCAAATGTGTCACTGGAGCCAATTTCACTGGATGTAACAACAAGGTAATCGGAGCAAAATTCTTCAACCTCCAAAACTCCCCTGAGCCAAACCTCAGTCCGGCGGACGACATGGGCCACGGAACCCACACATCATCTACTGCGGCGGGAGTGCCGGTGAGGGACGCCAGCCTGGAAGGAATCGGCGGCGGCACAGCTCATGGCGGGGTGGCGCGTGCCCGCATAGCGATGTATAAGGTGTGTTGGGGCAGGTCGGGGTGCAGCGACATGGACTTGCTGGCGGCTTTCGACGAGGCCATAGCCGACGGCGTAAACGTGATTTCTGTGTCTCTGGGAGGGACTCCGAGGGAGTTCTTCAGCGACCCTATGGCCATTGGAGCCTACCACGCTATGAAGAGAGGAATTCTCACCTCTTGCTCCGCCGGCAACAGTGGCCCTTCCATCTTGACCGTCGAAAATGTTGCTCCTTGGATTTTGACGGTTGCCGCTTCCAACACTGACAGGCTCTTCACCACCGTCGTTGATCTTGGCGATGGCCACAGAGTTGAGGGTATGTCCATAAATACCTTCATCCCTGAGAAAAAAATGTATCCTCTGATCAGTGGAGCCCTTGCTTCCAACGGAGACGCCTATGGCAATGCCAGTGCATGTGATCATGGGAGTCTAAGCAAGGAGAAGGTAAAGGGGAAGATAGTGTATTGCCTTGGACCAGGCAGCCAGGACTACATAATCAAAGAACTAAGTGGAGCAGGCACCATCATAGCTGCTTCAGTCCCATCAGACTACTCCACCATCACTGTTATTCCTGGTGTCTTTGTTTCTGGCAAAACCATTGATCTCTACATCAACTCCACCAAGGATGCTAAAGCTGTTATACAGAAGACTACAACCACCACAGGCCCTGCTCCATTTGTTGCTTCTTTCTCATCTAGAGGACCTCAATCCATCTCCATCAACATCCTAAAGCCTGATTTGACTGCTCCTGGAGTGGACATTCTAGCAGGATATTCCAAATTAACAACACTATCGGGGGACCCTGAAGACACCCGTAGAAACGTTTTCAATATATTGTCTGGAACATCTATGGCATGCCCACATGCTGCTGCTGCTGCTGCTTATGTCAAATCTTTCCATCCTGATTGGAGTCCTGCTGCGATTAAATCTGCTCTCATGACCACTGCCACCCCCATGAGAATCAACGACATTACTGCGGAGCTAGGATCTGGGTCAGGGCAGATCAACCCAGTGAAAGCATTGGATCCTGGCTTACTTTACAACATTAGCATGGAGTCCTACATTGCCTTCCTGTGCAAAGAAGGCTACAACAGTAGCAGCATTGGAATACTAATTGGCACCAAAGGCTTCGATTGCTCCAGCATTGACCCTGCAAAAGGCACTGATGGAATAAACTACCCTTCAATGCACACCCAGATCATATCATCCAGTGGTAGCATTTCTGCAATCTTTTATCGGAGTGTGACCAATGTAGGACTTGGAAACTCAACTTACAAGGCCAAAGTCTCAGCACCTAAGGGTCTTTCCATTGAGGTCATCCCAGACACATTGACATTTGGTGGGGTGAACCAAGAGTTGTCCTTCAAGGTTGTGCTGAAGGGTCCTCCAATGCCTAAGGACGCGTATATATTATCAGCATCTCTAGAATGGAATGACTCTCAACACAATGTAAGAAGCCCCATAGTTGTCTATAAACCGAACTTTTGA	2106	0.4815	MGELPVATVYAPEDHHHNLLATAMGDQQLARESKIHSYGKSFNGFVARLLSHEAEKLIEEENVVSIFPNTYNKLHTTRSWNFLGLPLKRNRHSSVESDMIVGVFDTGISLDCPSFNDSGYGPPPPAWKGKCVTGANFTGCNNKVIGAKFFNLQNSPEPNLSPADDMGHGTHTSSTAAGVPVRDASLEGIGGGTAHGGVARARIAMYKVCWGRSGCSDMDLLAAFDEAIADGVNVISVSLGGTPREFFSDPMAIGAYHAMKRGILTSCSAGNSGPSILTVENVAPWILTVAASNTDRLFTTVVDLGDGHRVEGMSINTFIPEKKMYPLISGALASNGDAYGNASACDHGSLSKEKVKGKIVYCLGPGSQDYIIKELSGAGTIIAASVPSDYSTITVIPGVFVSGKTIDLYINSTKDAKAVIQKTTTTTGPAPFVASFSSRGPQSISINILKPDLTAPGVDILAGYSKLTTLSGDPEDTRRNVFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTATPMRINDITAELGSGSGQINPVKALDPGLLYNISMESYIAFLCKEGYNSSSIGILIGTKGFDCSSIDPAKGTDGINYPSMHTQIISSSGSISAIFYRSVTNVGLGNSTYKAKVSAPKGLSIEVIPDTLTFGGVNQELSFKVVLKGPPMPKDAYILSASLEWNDSQHNVRSPIVVYKPNF*	702

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu7g01188	701	Pfam	Peptidase inhibitor I9	15	74	IPR010259	-
	Lapu7g01188	701	SUPERFAMILY	Subtilisin-like	80	548	IPR036852	GO:0004252\|GO:0006508
	Lapu7g01188	701	ProSitePatterns	Serine proteases, subtilase family, serine active site.	487	497	IPR023828	-
	Lapu7g01188	701	CDD	Peptidases_S8_3	73	523	IPR034197	-
	Lapu7g01188	701	PRINTS	Subtilisin serine protease family (S8) signature	164	177	IPR015500	-
	Lapu7g01188	701	PRINTS	Subtilisin serine protease family (S8) signature	96	115	IPR015500	-
	Lapu7g01188	701	PRINTS	Subtilisin serine protease family (S8) signature	486	502	IPR015500	-
	Lapu7g01188	701	Pfam	Fibronectin type-III domain	597	696	IPR041469	-
	Lapu7g01188	701	Gene3D	Peptidase S8/S53 domain	98	560	IPR036852	GO:0004252\|GO:0006508
	Lapu7g01188	701	Gene3D	-	564	698	-	-
	Lapu7g01188	701	ProSiteProfiles	Serine proteases, subtilase domain profile.	79	547	-	-
	Lapu7g01188	701	Pfam	Subtilase family	97	529	IPR000209	GO:0006508\|GO:0008236
	Lapu7g01188	701	CDD	PA_subtilisin_like	301	420	-	-
	Lapu7g01188	701	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	1	75	IPR037045	-
	Lapu7g01188	701	Gene3D	-	295	426	-	-
	Lapu7g01188	701	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	33	696	IPR045051	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu7g01188	Lapu-Chr7	24906668	24913422	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu7g01188	1	521	Subtilisin-like Serine Gene Family	AT5G03620	60.967	0.0	630

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu7g01188	-		-	gmx:100816428	1164.06