Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01170 ATGACCTCACAAGTTGTCCTACAAAATTTCCCTCACTCCGAAACCAAACCCTCCACAACTACCACCACCGATTCCACTCCCACTGCGCCGTCACTCGCCGTCACCAAGAGGTCTTCCACCGCTGTCACGCGCTCCACCAAGGACCGCCACACCAAGGTCAACGGCCGCGGCCGCCGAGTCCGAATGCCTCCGCTCTGCGCCGCGCGCATTTTCCAGCTTACGCGCGAGCTCGGCCACCGCTCCGACGGCGAGACCATCGAGTGGCTCCTCCGCCACGCCGAGCCTTCTATCATCGCTGCCACCGGCTCCGGTACCGTCCCCTCTGCTCCCATCTCCTCCGTCGCAACCTCTATTCCCTCCTCCGAGTCCTCCGTCTCGGTACCGGTGGTCGGCGGCCAAGGAATGTTCTCTGTGGCGCCGCCAAGTTGCCGACTCGACCTGTCTCCGCCGCCGGGAATGGATTTCGCATCGTCGAACGGCTTTCGGCACATGCCGTTCACGGCGCTGCTGTTGCAGCCGGCTACGGCGGAGGATAACCAGAACGACGAGTCTCTCGGCGAACAATGA 567 0.6332 MTSQVVLQNFPHSETKPSTTTTTDSTPTAPSLAVTKRSSTAVTRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGSGTVPSAPISSVATSIPSSESSVSVPVVGGQGMFSVAPPSCRLDLSPPPGMDFASSNGFRHMPFTALLLQPATAEDNQNDESLGEQ* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01170 188 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 28 132 IPR005333 GO:0003700
Lapu7g01170 188 MobiDBLite consensus disorder prediction 1 41 - -
Lapu7g01170 188 Pfam TCP family transcription factor 45 146 IPR017887 -
Lapu7g01170 188 ProSiteProfiles TCP domain profile. 46 100 IPR017887 -
Lapu7g01170 188 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01170 Lapu-Chr7 24223223 24223789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01170 46 175 TCP Transcription Factor Family AT2G37000 60.769 4.21e-43 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lapu7g01170 TCP 2.8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01170 - - vun:114191143 315.079