Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01168 ATGCCAAACACAAAAGAAGAAAAGGGAATTTGTGGTTTTGTTGAGTCCGAAAAGACAAAGCTTTTTGGGATCAAATTATACCTATTTGAACTTAAGTCTAGTTCAAGTCAGGTGGCAATGAAGTGCTTTCCATTCTACTTTAGAGGGAAGAAGAATGGTCCTAAGATCTTGCAGTCGATATCTGGTCGGTCCAACAGTTCTACTTGTGTTGAGGCTGAGATGAGGAGATCTGGTTCTGAATTGAACTCTATGGATGCCTCAGACACCAGTACGGAGTCCCTTAGGAGAACTGCATTTCCCAGTTTGTCGCAAAGACCCAGCAACCTCAGAGTATTCACTGTATCCGAACTAAAAACATGCACTAAGAGTTTTAGTCGCTCTGTGATGCTTGGAGAGGGTGGGTTTGGGTGTGTCTACAAGGGGTTGATCAAGAGTGTAGATGATCCTTCCACAAGAGTTGAAGTTGCAGTTAAACAGCTCGGAAGAAGAGGAATTCAGGGGCATAAGGAATGGGTAACAGAAGTGAATGTTCTGGGTATTGTGGAGCATCCGAATCTGGTGAAACTAGTGGGATACTGTGCTGATGATGATGAAAGGGGAATCCAGAGGCTTCTGGTTTACGAATATATGCCCAATAGAAGTGTGGAACACCATTTATCACCACGATCAGAAACTCCTCTCCCATGGAGTAGGAGGTTGAAAATAGCCCAAGATGCGGCTCGTGGCTTAACATACCTGCATGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTTTGGACGAGCAGTGGAATGCAAAGCTGTCAGACTTTGGGCTAGCAAGATTGGGACCATCTGATGGGTTAACTCATGTCTCAACAGCGGTTGTAGGAACAATGGGTTATGCAGCTCCAGAATATGTTCAAACCGGACGTCTCACATCAAAGAGTGATGTATGGAGCTATGGTGTCTTCCTTTATGAACTCATTACAGGCCGGCGTCCTATTGACCGAAATCGCCCCAAGGGTGAGCAGAAGATGTTGGAATGGGTAAGGCCATACCTTTCAGATGGGAGGAAATTTCAAATAATATTGGATCCAAGACTTGAGAGAAAACACCTCTTCAAGTCAGCACAAAAACTTGCGATAATAGCCAACAAATGCTTGGTCAGAAACCCAAAGAATCGCCCAAAGATGAGTGAAGTGTTACAAATGGTGACTCAGGTTGTGGAGTCTTCAGTGAGTACTAATCCACAGCCACCCTTGAAGAGTGTTGTAGCCTCAGCAGAAGCTTCTCAGGGGACTGAAACAGTGAACAAGAAAATTACCATGGATCAAAAACCAGATTGCAATTGGTTAAGGATGTGGAGGCCAAAACTTTTTAAGAGCATGTAG 1392 0.4361 MPNTKEEKGICGFVESEKTKLFGIKLYLFELKSSSSQVAMKCFPFYFRGKKNGPKILQSISGRSNSSTCVEAEMRRSGSELNSMDASDTSTESLRRTAFPSLSQRPSNLRVFTVSELKTCTKSFSRSVMLGEGGFGCVYKGLIKSVDDPSTRVEVAVKQLGRRGIQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLVYEYMPNRSVEHHLSPRSETPLPWSRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYVQTGRLTSKSDVWSYGVFLYELITGRRPIDRNRPKGEQKMLEWVRPYLSDGRKFQIILDPRLERKHLFKSAQKLAIIANKCLVRNPKNRPKMSEVLQMVTQVVESSVSTNPQPPLKSVVASAEASQGTETVNKKITMDQKPDCNWLRMWRPKLFKSM* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01168 463 FunFam Serine/threonine-protein kinase BIK1 90 209 - -
Lapu7g01168 463 FunFam Serine/threonine-protein kinase PCRK2 210 419 - -
Lapu7g01168 463 ProSiteProfiles Protein kinase domain profile. 124 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01168 463 PANTHER OS01G0588500 PROTEIN-RELATED 86 408 - -
Lapu7g01168 463 ProSitePatterns Protein kinases ATP-binding region signature. 130 158 IPR017441 GO:0005524
Lapu7g01168 463 Gene3D Phosphorylase Kinase; domain 1 98 209 - -
Lapu7g01168 463 Pfam Protein kinase domain 126 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01168 463 Gene3D Transferase(Phosphotransferase) domain 1 210 424 - -
Lapu7g01168 463 CDD STKc_IRAK 130 407 - -
Lapu7g01168 463 SUPERFAMILY Protein kinase-like (PK-like) 100 405 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01168 Lapu-Chr7 24185665 24190203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01168 40 435 Glycoside Hydrolase AT3G07070 41.928 1.55e-93 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lapu7g01168 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01168 - - gmx:100305438 820.076