Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01149 GAATATACTGTGACACAGCCCCACCACGGGAAGCGCACTTTTCTTACTTCCGAAAACCGTGTGCTGAGATATATTGGCGGCGGCGGCGGCACAGAGGAGAAGAAAGGATCAATGGCGGTTCCAGGGAGGCGCAACGGCATGAACGATGACGACGAGGACTTAGGCGAAAACGCCCTTTTCGAAGAAGAAGGTCTCGTCGAAGACTACACCGATACCCCTCCTCACCTCCGCGACCTCTCCGCCGCCGCGCAGGTCGGCGATGTTAACGCACTCCGCCTCGCTCTAGATAACTTGACTGGTAGTATCGATGAGCCAGTGGAGGATGGGGATACTGCTCTTCATTTGACATGTCTATATGGCCATTTGGCTTGTGTCCAGCTGCTACTAGAAAGAGGAGCAAACATGGAGGCTAAGGATGAAGATGGTGCAATTCCTTTGCATGATGCTTGTGCTGGAGGATTTACTGAGATAGTCCAACTGCTACTTAACAGAGCAAATGACGCAGAACATATAAAGAGAATGCTGGAATCAGTTGATTCTGAGGGTGATACTCCTCTCCATCATGCAGCAAGAGGCGAGCATGTTGATATAATTAGTTTGTTGCTGTCTAAAGGGGCATCTTCCACAAAGGAAAACTTATACGGAAAGACCCCGGGAGATCTACCTGAACAGCACACAGATGCTTGGAGTTTGCTTCACGCTGCCGTCCTTGCCATGGAATGCTAA 726 0.5028 EYTVTQPHHGKRTFLTSENRVLRYIGGGGGTEEKKGSMAVPGRRNGMNDDDEDLGENALFEEEGLVEDYTDTPPHLRDLSAAAQVGDVNALRLALDNLTGSIDEPVEDGDTALHLTCLYGHLACVQLLLERGANMEAKDEDGAIPLHDACAGGFTEIVQLLLNRANDAEHIKRMLESVDSEGDTPLHHAARGEHVDIISLLLSKGASSTKENLYGKTPGDLPEQHTDAWSLLHAAVLAMEC* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01149 241 Gene3D - 73 238 IPR036770 -
Lapu7g01149 241 Pfam Ankyrin repeats (3 copies) 141 209 IPR002110 GO:0005515
Lapu7g01149 241 SUPERFAMILY Ankyrin repeat 72 221 IPR036770 -
Lapu7g01149 241 ProSiteProfiles Ankyrin repeat region circular profile. 108 140 - -
Lapu7g01149 241 PANTHER SOWAH (DROSOPHILA) HOMOLOG 61 235 - -
Lapu7g01149 241 ProSiteProfiles Ankyrin repeat region circular profile. 141 167 - -
Lapu7g01149 241 ProSiteProfiles Ankyrin repeat profile. 141 173 IPR002110 GO:0005515
Lapu7g01149 241 Pfam Ankyrin repeat 108 139 IPR002110 GO:0005515
Lapu7g01149 241 MobiDBLite consensus disorder prediction 28 52 - -
Lapu7g01149 241 ProSiteProfiles Ankyrin repeat profile. 108 140 IPR002110 GO:0005515
Lapu7g01149 241 SMART ANK_2a 181 210 IPR002110 GO:0005515
Lapu7g01149 241 SMART ANK_2a 141 170 IPR002110 GO:0005515
Lapu7g01149 241 SMART ANK_2a 108 137 IPR002110 GO:0005515
Lapu7g01149 241 ProSiteProfiles Ankyrin repeat region circular profile. 181 207 - -
Lapu7g01149 241 FunFam BRCA1-associated RING domain protein 1 73 240 - -
Lapu7g01149 241 ProSiteProfiles Ankyrin repeat profile. 181 213 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01149 103 225 Ion Channels AT2G26650 29.932 2.16e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01149 - - gmx:100527544 355.525