Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01146 ATGGGATCGTGCCTCTCCATCGCGGGGGCGTCATCGCCTTCCATAGATACATGTGATGAGCCATTATCGACTCTTAGCACATTCTCTGATTACAGAATTGAAACGCGGGTCCACAGAGTTCCTGGGAGATTGTTCTTGAACGGTTCGTCGCAGGTTGCTTCCTTGTTCTGTAAGCAAGGTCGGAAAGGGATCAACCAGGATGCCATGCTTCTTTGGCACAACTTCTGTTCCAAGGACGACTCCGTTTTCTGCGGTGTTTTTGATGGGCACGGACCTCATGGCCATCTGGTTGCAAAGAAACTCAGGGATTCCTTTCCTTTGAAGCTCATTGCTCAATGGAATTCCCTGCATAGCAGCACCTACACCTACCGCAATTTCTTCAACACATCGATCCATGGCTTCAAACCTGATACCGTTGCCCCAACTAACATTGCCACGATCAGACAATCTTTTGTCAATGCTTGCAAGGTCATGGACAGAGAACTCAAAATGCACAATCAGATTGATTGCAGCTCTAGTGGTTCCACCGCTGTTACCTTGCTCAAGCAGGGCCTCGACCTCGTTATTGCTAATGTGGGTGACTCCAGAGCTGTATTGGCTACCGAAGATCGTAATGGTTCCCTTATTGCCGTTCAGTTGACCACTGACCTTAAGCCTGATCTTCCAAGGGAAGCAGAGAGGATAAGGATTTGTAAGGGAAGGGTGTTTGGCCTTAAAAATGAACCAGGGATTTCTAGAGTATGGCTGCCCAATGTTAATTCCCCTGGGCTTGCCATGTCAAGGGCTTTTGGAGATTTTTGTCTCAAGGATTTTGGAGTCATCTCTGTTCCTGATTTCTCCTATCATCGCCTCACTCACAGGGATCAATTTGTTGTGTTAGCCACAGATGGGGTGTGGGATGTTTTATCAAATGAAGAAGTTGTGTCCATAGTGGCATCTACTCCACGCTCTTCAGCAGCTCGAATACTGGTTGATGCAGCTGTTCAAGCATGGAAAACCAAGCTTCCCACTTCTAAGGTTGATGATTGCTCTGTAGTTTGCCTCTTCCTTAATTCGGAGTCTGACTTAAAATCATCAACTACTACCATAGACCCATCAAATGTGGTTGAGCAGTCACCACCACTACTTAGAGCGGAACTTGAACAAAACTGCGAATAG 1158 0.468 MGSCLSIAGASSPSIDTCDEPLSTLSTFSDYRIETRVHRVPGRLFLNGSSQVASLFCKQGRKGINQDAMLLWHNFCSKDDSVFCGVFDGHGPHGHLVAKKLRDSFPLKLIAQWNSLHSSTYTYRNFFNTSIHGFKPDTVAPTNIATIRQSFVNACKVMDRELKMHNQIDCSSSGSTAVTLLKQGLDLVIANVGDSRAVLATEDRNGSLIAVQLTTDLKPDLPREAERIRICKGRVFGLKNEPGISRVWLPNVNSPGLAMSRAFGDFCLKDFGVISVPDFSYHRLTHRDQFVVLATDGVWDVLSNEEVVSIVASTPRSSAARILVDAAVQAWKTKLPTSKVDDCSVVCLFLNSESDLKSSTTTIDPSNVVEQSPPLLRAELEQNCE* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01146 385 CDD PP2Cc 51 350 IPR001932 -
Lapu7g01146 385 PANTHER PROTEIN PHOSPHATASE 48 348 IPR015655 GO:0004722|GO:0006470
Lapu7g01146 385 SMART PP2C_4 43 348 IPR001932 -
Lapu7g01146 385 Gene3D - 47 352 IPR036457 -
Lapu7g01146 385 SUPERFAMILY PP2C-like 48 352 IPR036457 -
Lapu7g01146 385 Pfam Protein phosphatase 2C 59 326 IPR001932 -
Lapu7g01146 385 ProSiteProfiles PPM-type phosphatase domain profile. 52 350 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01146 Lapu-Chr7 23714210 23716330 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01146 35 354 PP2C-type Phosphatase Gene Family AT1G16220 55.689 8.63e-137 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01146 - - gmx:100816114 539.65