Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01141 ATGGGTAAGGGAACTCGTGAGAAAGAGTGTGCATTGCCTAGCAGAAATTCTAATAGTAGTCGTCACACTCACCCAGGACGAGTTTGGGGAATTCTTCATGTTATAAAGTACCATCATTGGCGTCAGGTGAAGAGAAGGCTTACACACAGAAGGCATGGTGGTGGAAGACCTGATGCAAGAGCTGAAAGTCCAGGAACTTCTGATGATTCTGGGCTTAACTCTATGCCAGAACATTGTACGCCGTCTACAGAGTTATCCAATGACGAAGAAAAGCCGGTACAGTCCTCTTCTCCAGCCAAAAGTTCTATCAAATCCCGATTAAGGTCGCTTCTCAATGAAGATATATATAGAAGGAAAGGTCGACACAAGAGAAGCTCAACTTGCCCTGCAAAGTCACAACTACAACTAACTCATTCTGATTCTGTTCACAACTTGGAGGTTGACCCACTTAGTGAATTGTTACTAACTGTTCAGAGCCCTGAACCAGTCCTAGAAACCTTTCAGAACCATCTTGCAGCAGGCACACTGGATGTCTTGTCACCAGTATTCTCAGATAAACCAATTGCCAACAATGACAAATGTGTAGATTGTGGCACGGTGTTTTCTAGTGACGTTTTGGAACAAAGCAAGATTCATAAGCACTTGACCTCTCCTAATCAAGGTGGCCCGGAAGAGAAGATGTTCAATGCACAGATACTTACAACTGATGCTTCACCCCACCTCTTCAAGGACTTTCTTGATGCATTGGATGTAATAAACTCAAACAAGAACTTCCTATTAGAATATATACATGATCCAGGCTCTCCTTTGCCATTTCACACTCACAGTCAGGTATCTTTGAACGCTAGTAAGAGACGAGCCAGATCTCTTTCATTTCCTCTATCTGCCTCATCATCAGGAAGGCAAGATTCTGATCCAGGTCAACTCATAAACCAAATGATAGATGATCTGTTAATTGAAGAAAAAGAAAAGACGCAAACTCAAAGTAACATGCAAAATGAATCCATGCATGACTCTTCAGAAGATTCTCACCAACAGTCCGTACCATCTGGTTCTTCGCATAATTCTAATGAATTAGGTGAAAGAGATTCTAATTCTTCATCAGTTCCACCCCAGGTTCCCAACAATGTGAGACCTAGGCACTTCAGGGATCTTAGAAAGAAGATGAGGCGCATAATTGAAGAGGGAAGAAATGAGGGGCATCGCATTACCATGGATGCTATACTTGACAAAATTCCTCGGGGAAAAAGGCTTACAAAAAATGTGAAGAAGTTGATTCATGACATGTCCAAAGACCCCACAATCAATGGGGAAGGTGAAGACAGTTCAACTAGTGGTTTTGGGAGCCGTCTCTCTTCTATGTCCTTCAACAAGCGTCAACGATCACCCATGAGGAATTCTTCACTAAAAGAATCAATTGGAAGATATTCTCAGTTGTACGAGACTTGTTTTCAAAGTGAAGCCAAGTATCCTAAGGTTGAAAACATAAGAATGAAAGAAGAGAAAAATTCTATATTAAAGACCCCAAAATCCTTCAAGAGGTTCCTTTCAATGCCTAATTTGAAATCTTACTTTCACCAGAATGAGGAGCCTTCTTTCCTTTTATCCCCCCAGAACTCAATGAAGATATATGGAGATAGAAACATCATCCCAAATGACATTGATCATCACCATAGGAGGTTTGACCATAGTGATGACTCAAAAAGTCAAAATTTTCAAGCAACACTTGCTAATAACACAAATCAAGAAACCAGCTTGAATGCTGACCAAAAGCAACTGCTTGTCAGGAGTGCTTCAAAATCAGGAATAGATTTTAATAATGAGGAAAAGGAAGATAAGATCATAGGAATTGAAGGTTTACAAAACTTGAGAGACCGTGGACAAGACATTGGAGCTGAAACAGATGCTTACCCAGCGGAAGCAAACTCGGTCTTCTCTGCTGATACCAGCTTTCTTGACGTTTCATTTGATCTGGAGAACTTAGACATACCGGAAGAAGAATTAAACTCAGAGTTAAAGCAGGAGCAAGATGATGGATCGGATCATATAGCAGAGACACAAGAAGCAGAAGAGGATAACCGGGAGGAGGTTGATAATTTTCAAAACCTTGGAACTCTAAGCAAGAGCTTCAACTATGAAATTCCATGTATTGAAGTTGATCCAAGTCATGAAGCTGCATTTAATTATGTGAGAAAGGTTTTAGACCTCTCTGGGTTCACTAGCCATGATTCCCTAGGGATATGGTATTCAGATGACCAACCAGTTGATCCTTCAGTGTATGAAGAACTGGAGGGTTGCTTGCTTCTTGATCCTGATTGTTCTGGTAACAATGGTGAAGGTGGAGAATGTAATCACATGCTTCTGTTTGATGTAGTAAATGAGGGGTTGTTGGAGATTTTTGGAAGATCATACAACTATTATCCAAGACCCTTGTCTTCTCTCTCCCATGTTCATCCACTGCCAACAGGAGAAAATGTTCTCTGTGATGTGTGGAAACTTATTAGCTGGTATCTGAACTCAACAATATTTGATCTTTACACATCATTGGATTATTATGTGAGCAAAGATCTATCAAAATATGATGGGTGGATGAATCTTCAATTTGATTCAGAATGTGTGGGGCTTGAGCTAGATGACTTAATTTTTGATGATCTTTTGGAGGAAATAATATTCACCCAATTAACCTAG 2688 0.404 MGKGTREKECALPSRNSNSSRHTHPGRVWGILHVIKYHHWRQVKRRLTHRRHGGGRPDARAESPGTSDDSGLNSMPEHCTPSTELSNDEEKPVQSSSPAKSSIKSRLRSLLNEDIYRRKGRHKRSSTCPAKSQLQLTHSDSVHNLEVDPLSELLLTVQSPEPVLETFQNHLAAGTLDVLSPVFSDKPIANNDKCVDCGTVFSSDVLEQSKIHKHLTSPNQGGPEEKMFNAQILTTDASPHLFKDFLDALDVINSNKNFLLEYIHDPGSPLPFHTHSQVSLNASKRRARSLSFPLSASSSGRQDSDPGQLINQMIDDLLIEEKEKTQTQSNMQNESMHDSSEDSHQQSVPSGSSHNSNELGERDSNSSSVPPQVPNNVRPRHFRDLRKKMRRIIEEGRNEGHRITMDAILDKIPRGKRLTKNVKKLIHDMSKDPTINGEGEDSSTSGFGSRLSSMSFNKRQRSPMRNSSLKESIGRYSQLYETCFQSEAKYPKVENIRMKEEKNSILKTPKSFKRFLSMPNLKSYFHQNEEPSFLLSPQNSMKIYGDRNIIPNDIDHHHRRFDHSDDSKSQNFQATLANNTNQETSLNADQKQLLVRSASKSGIDFNNEEKEDKIIGIEGLQNLRDRGQDIGAETDAYPAEANSVFSADTSFLDVSFDLENLDIPEEELNSELKQEQDDGSDHIAETQEAEEDNREEVDNFQNLGTLSKSFNYEIPCIEVDPSHEAAFNYVRKVLDLSGFTSHDSLGIWYSDDQPVDPSVYEELEGCLLLDPDCSGNNGEGGECNHMLLFDVVNEGLLEIFGRSYNYYPRPLSSLSHVHPLPTGENVLCDVWKLISWYLNSTIFDLYTSLDYYVSKDLSKYDGWMNLQFDSECVGLELDDLIFDDLLEEIIFTQLT* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01141 895 MobiDBLite consensus disorder prediction 114 133 - -
Lapu7g01141 895 MobiDBLite consensus disorder prediction 66 105 - -
Lapu7g01141 895 MobiDBLite consensus disorder prediction 430 470 - -
Lapu7g01141 895 MobiDBLite consensus disorder prediction 436 470 - -
Lapu7g01141 895 Pfam Protein of unknown function (DUF3741) 225 268 IPR022212 -
Lapu7g01141 895 MobiDBLite consensus disorder prediction 670 689 - -
Lapu7g01141 895 MobiDBLite consensus disorder prediction 670 696 - -
Lapu7g01141 895 MobiDBLite consensus disorder prediction 45 105 - -
Lapu7g01141 895 Pfam Domain of unknown function (DUF4378) 727 888 IPR025486 -
Lapu7g01141 895 MobiDBLite consensus disorder prediction 324 384 - -
Lapu7g01141 895 MobiDBLite consensus disorder prediction 324 374 - -
Lapu7g01141 895 PANTHER PROTEIN TRM32 1 892 IPR044257 -
Lapu7g01141 895 Coils Coil 683 703 - -
Lapu7g01141 895 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01141 Lapu-Chr7 23477799 23482260 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01141 705 882 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 51.648 2.02e-57 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01141 - - gmx:100807303 1296.95