Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01137 ATGGGTTCATTCTCTGGCACTTGTGAAATTGTCGAAGCAAGTACAGAGAAAGCTGCCGGGATATATCAGTCCAATTCTGGATATAACTTGGATGAGAAAAATCAGAAGCATCCTGTGCTGAAACTGGGATATAAGGACAATCTAGATGATGATATTAATAAGCTGTTTGAATCAATTACTCTTAAATCTTCATCAAGGGATTCTGGCTTTTTACAGGATGGTACAAGCCCTAAGATGAAAAGTTCATTGAAAAAACCAATTACAGTGGGTGCTTCTCGGTCCCCACGAGTTGGACCCTCTGAGCCTTTGACTTTGAAGCAGGCACTAAGAGACCTATGTATATCTAAGGCATCAGAAATGGCTGCCATGAAAAGATTATCGAAGTCATCTGCTTCTCCAAGAATATCTGAGGTTGGGAAGATACAGACATTGTACAATTCAGTCGTAGTTGAAGGTAGACAATCTGGTCCTTCTAATGTTGAGAGTAAAGGGAGTACAACAGAAATATCACTAGTGCCAGAAGAGAGCAGCTCACATGCCTTGGATAAAGCTTCCCAGTCTCACCCAACTGTTAAAAGCGCATCACTGAGCCAAAATGTTCAATCTTCCAAAATTGCTGTTGGAACTACTGAAAATGACGCCAGGGCTTCATTGATGTCAGGTGATTTGGCTAGTTCATCAAGTAAAGTTGGGGTTCTATCACAGTCTTCGGAACCTGCTCAAATAGAAAAACAAGTATCGGCATCTTCTCCGTCTAGTTGTAGCACCAATGGGAGTAAGTTAGAGTTGTCTGAAAACGCTTCTTCCTCTAATAAATTAGGAAATAAAACATCTGTATCAAAGAATGGGCAGAAAGGTAGGTCACAAACAGTCTCTTCCTCATCCACTTCAGTAAATGGCAATAGAGTGTGCAAACTGTCACGCCATGCCCCTCTTACTGTTAAATCAATTATCAAGAACAAAAATTTGGGTAAGAAAAAACTAAAGCAGGATTCTGTTTCTGCTTTATTTGATCCTACATCCGATGAAGTAAATAACAAGTCAGTTACTGGTACAACTCAAATTGTTTGTGAGAGATGTTGGTGTGCTATAGAAAACAACAAAGGTATTTTATCGGTAGACTCTACTAGTCCTGGAGATGGAATAAACTCTATTAATGTGCAGTCAGGTTCAGCATCATCTGGCTGTAATAGCCTCAGAGAAGATACAAAGAAAAAGAATACCATATTGAAAGAGCAACTTGAATTTTCACAAAGTTCAAAGAGTAGCCAAGGTGACTACAGTAGTAGTACAAGTACAAGTGGCGAGAGTAATCTCAGTGGGTCTAGTTGTGGCAATAGGCCTCACATGTCAAAGGATGTTAGATGGGAAGCCATACGCCATGCTCAAATGCAGCATGGAGTCTTGGGCTTGAGACACTTCAATCTTTTGAAGAAGCTAGGTTGTGGAGACATTGGGACTGTATATCTTGCTGAGCTAGTTGGCAAAAGTTGTTTGTTTGCTATCAAGGTGATGGACAATGAATTTTTGGCAAGAAGGAAGAAGATGCCTAGGGCTCAAACTGAAAGAGAAATATTAAGGATGCTGGATCATCCTTTTCTTCCGACTCTGTATGGGCATTTTACATCAGATAATTTATCATGTCTGGTCATGGAGTATTGTCCAGGTGGTGATCTTCATGTTCTACGGCAGAAACAGCTTGGTAGAAGCTTTTCAGAGCCCGCAGCAAGGTTTTATGTTGCTGAAGTCCTTCTTGCTTTGGAGTATTTGCACATGCTTGGAGTGGTTTACCGTGATTTGAAACCAGAAAACATTCTTGTTCGAGAAGATGGTCACATTATGCTTACAGATTTTGATCTGTCACTTAAGTGTGATGTTAGCCCTACACTTCTGAAGTCATCTTCTGATGTGGATCCTGCTAAGAATTCTGGTCCTTGTGCACAATCTAATTGCATTGAGCCATTTTGTATTGAACCATCCTGTCAAGTTCCATGCTTCAGCCCTAGACTCCTACCTCCTGCCGCAAAAACAAGGAAATTAAAAACAGATCTTGCTGCCCAGCTCAGATCATTGCCACAACTCGTGGCTGAGCCCTCTGATGCAAGATCAAATTCATTTGTTGGTACACATGAATATTTGGCGCCTGAGATAATCAAAGGAGAGGGACACGGAGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTATATGAGCTCTTATATGGCAGAACACCCTTCAAAGGTTGTAATAATGAAGAAACATTAGCCAACGTGGTGCTGCAAGGTCTCAGATTCCCTGATACCCCATTTGTTAGTTTCCAAGCGAGGGATCTCATTAGAGGGTTGTTGGTTAAAGAGCCTGAAAACCGTTTGGGTACAGAGAAAGGGGCTGCTGAGATAAAACAACACCCCTTCTTTGAGGGCCTTAATTGGGCCTTAATTCGTTGTGCTATCCCACCAGAACTTCCAGACTTACGTGAATTTGGAGTTTCAGAGATGATTCCACAGTCCCAGTGCAAGGGTGTCAAGTATGTAGAGTGTAATGCAGCTGGAGAGCAAGTGGAATTTGAGTTATTTTAA 2580 0.4143 MGSFSGTCEIVEASTEKAAGIYQSNSGYNLDEKNQKHPVLKLGYKDNLDDDINKLFESITLKSSSRDSGFLQDGTSPKMKSSLKKPITVGASRSPRVGPSEPLTLKQALRDLCISKASEMAAMKRLSKSSASPRISEVGKIQTLYNSVVVEGRQSGPSNVESKGSTTEISLVPEESSSHALDKASQSHPTVKSASLSQNVQSSKIAVGTTENDARASLMSGDLASSSSKVGVLSQSSEPAQIEKQVSASSPSSCSTNGSKLELSENASSSNKLGNKTSVSKNGQKGRSQTVSSSSTSVNGNRVCKLSRHAPLTVKSIIKNKNLGKKKLKQDSVSALFDPTSDEVNNKSVTGTTQIVCERCWCAIENNKGILSVDSTSPGDGINSINVQSGSASSGCNSLREDTKKKNTILKEQLEFSQSSKSSQGDYSSSTSTSGESNLSGSSCGNRPHMSKDVRWEAIRHAQMQHGVLGLRHFNLLKKLGCGDIGTVYLAELVGKSCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYGHFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLKCDVSPTLLKSSSDVDPAKNSGPCAQSNCIEPFCIEPSCQVPCFSPRLLPPAAKTRKLKTDLAAQLRSLPQLVAEPSDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGCNNEETLANVVLQGLRFPDTPFVSFQARDLIRGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLREFGVSEMIPQSQCKGVKYVECNAAGEQVEFELF* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01137 859 SMART serkin_6 474 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01137 859 MobiDBLite consensus disorder prediction 153 206 - -
Lapu7g01137 859 MobiDBLite consensus disorder prediction 414 448 - -
Lapu7g01137 859 MobiDBLite consensus disorder prediction 373 399 - -
Lapu7g01137 859 MobiDBLite consensus disorder prediction 65 82 - -
Lapu7g01137 859 SUPERFAMILY Protein kinase-like (PK-like) 449 824 IPR011009 -
Lapu7g01137 859 FunFam serine/threonine-protein kinase D6PK-like 558 625 - -
Lapu7g01137 859 MobiDBLite consensus disorder prediction 373 398 - -
Lapu7g01137 859 CDD STKc_phototropin_like 472 829 - -
Lapu7g01137 859 MobiDBLite consensus disorder prediction 414 447 - -
Lapu7g01137 859 Pfam Protein kinase domain 475 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01137 859 Pfam Protein kinase domain 700 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01137 859 Gene3D Phosphorylase Kinase; domain 1 472 553 - -
Lapu7g01137 859 ProSiteProfiles Protein kinase domain profile. 474 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01137 859 FunFam serine/threonine-protein kinase D6PK-like 701 824 - -
Lapu7g01137 859 MobiDBLite consensus disorder prediction 65 101 - -
Lapu7g01137 859 FunFam Serine/threonine-protein kinase D6PK-like 472 557 - -
Lapu7g01137 859 MobiDBLite consensus disorder prediction 229 302 - -
Lapu7g01137 859 ProSitePatterns Serine/Threonine protein kinases active-site signature. 595 607 IPR008271 GO:0004672|GO:0006468
Lapu7g01137 859 PANTHER FLIPPASE KINASE 1-RELATED 211 825 - -
Lapu7g01137 859 Gene3D Transferase(Phosphotransferase) domain 1 699 824 - -
Lapu7g01137 859 Gene3D Transferase(Phosphotransferase) domain 1 554 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01137 Lapu-Chr7 23251576 23258170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01137 1 859 AGC Kinase Gene Family AT3G52890 53.125 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lapu7g01137 Pkinase 2.8e-36 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01137 7 23251576 23258170 Lapu6g00626 6 6576066 6581385 ECH
Lapu7g01137 7 23251576 23258170 Lapu7g01137 7 23251576 23258170 ECH
Lapu6g00452 6 4683560 4684279 Lapu7g01137 7 23251576 23258170 PCT
Lapu6g00626 6 6576066 6581385 Lapu7g01137 7 23251576 23258170 PCT