Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01135 ATGGACTTGCAGTTGAAGCAATGGAGAAACCAGCATGAGTCAGAGCAACAACAACATTCCCCAAACATGCAAAAATTTCTCCCTCAACAGCCTCCACCACCTGCCTCTGCAGCACTCCCTGTCTTTCTACCTCAACCCAACACCGAAGTCAGCACTCTGCTACCGTTTTCTGATTCCAACCTAGCTTCTGCTCCTCCCAGATTTCTCAGGATGGAGAGTTGTTTCAGCTTTGCACAGTGGCAAGAGCTTGAGTTGCAGGCTCTGATATTCAGGTACATGCTGGCCGGTGCTCCTGTTCCTCCTCAGCTGCTTCAACCAATCAAGAAAAGCTTCCTTCATTCCCCTCCCCCTTTCCTTCAACTTTATCACCCTGCTTTGTTGGAATCAGGGTACTATTGGGGAAGAGAAGCAGTGGATCCGGAGCCGGGGCGGTGCCGGAGGACAGACGGGAAGAAGTGGCGGTGCTCGAGGGAGGCGATGGAGGGTCAGAAGTACTGCGAGCGGCACATGCATCGTGGCCGAAACCGTTCAAGAAAGCCTGTGGAACAACCTCATGCATCTTCTTCTTCTTCACGCTCTGCTTCCTTGAAACATCATCTCCTTAACCTCAATCAGAGTTCCTCTGGGGCCAAGAGTAACAGCAAGAGCGTGTCTGAAAACCATGATCATGTGGATGGGGATGGCAGATCTGGTGGCCATGTCCTGAGGCATTTCTTTGATGATTGGCCAAGGACACTGCAAGAGCCTGACCATGGTGAAAGCAATGGTAGCCAGAACAACAACACTGGAACATGTCTTTCTATCTCAACACCAGGAATCACTTCCTCGGATGTGTCATTGAAACTTTCCACTGGTCATGCAGAGGATACATGCCACGTGACTTCCGTGGGAGGACCACTTGCAGAGGTACTGAGATCATCCACCTCCACTTCTTCACCAACCAGTGTTCTGCTACAGTTGCCAACTAGTTCTGCTTGTGAGGCCAGCTTCATTAGCACCTAA 1002 0.508 MDLQLKQWRNQHESEQQQHSPNMQKFLPQQPPPPASAALPVFLPQPNTEVSTLLPFSDSNLASAPPRFLRMESCFSFAQWQELELQALIFRYMLAGAPVPPQLLQPIKKSFLHSPPPFLQLYHPALLESGYYWGREAVDPEPGRCRRTDGKKWRCSREAMEGQKYCERHMHRGRNRSRKPVEQPHASSSSSRSASLKHHLLNLNQSSSGAKSNSKSVSENHDHVDGDGRSGGHVLRHFFDDWPRTLQEPDHGESNGSQNNNTGTCLSISTPGITSSDVSLKLSTGHAEDTCHVTSVGGPLAEVLRSSTSTSSPTSVLLQLPTSSACEASFIST* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01135 333 Pfam WRC 140 182 IPR014977 -
Lapu7g01135 333 MobiDBLite consensus disorder prediction 216 248 - -
Lapu7g01135 333 MobiDBLite consensus disorder prediction 1 33 - -
Lapu7g01135 333 MobiDBLite consensus disorder prediction 250 264 - -
Lapu7g01135 333 ProSiteProfiles WRC domain profile. 139 183 IPR014977 -
Lapu7g01135 333 ProSiteProfiles QLQ domain profile. 74 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lapu7g01135 333 MobiDBLite consensus disorder prediction 182 215 - -
Lapu7g01135 333 PANTHER GROWTH-REGULATING FACTOR 5 26 277 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lapu7g01135 333 Pfam QLQ 75 107 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lapu7g01135 333 SMART QLQ_2 73 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lapu7g01135 333 MobiDBLite consensus disorder prediction 166 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01135 Lapu-Chr7 23234272 23237293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01135 1 324 GRF Transcription Factor Family AT3G52910 43.152 4.16e-77 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lapu7g01135 WRC 2.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01135 - - vum:124840321 502.286