Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01131 ATGTATTCTGGTAATGCAACCGGCAGCAGCAGAGCCTCTTCCGGAACCGGCCGCTACCGCGGCGTGCGGCGTAGGAGCAACGGAAAATGGGTGTCTGAGATCCGTGAGCCGAAAAAGCCTAGTAGGATTTGGTTAGGTACATTCCCTACACCTGAAATGGCCGCAGTGGCTTATGATGTGGCAGCTTATGCTCTAAAGGGTAAGGATGCTGAGCTCAATTTCCCTGACTCTGCTTCTTCCCTTCCGGTCCCCGCTTCACTCTCGGCGCGTGACATTCAGGTGGCGGCAGCCGCTGCGGCGGCGGCTGCTGGAGCTGCGAAGGATGCTATGCAGACACCAACAGGGAATTATAACTCTTCAGGGGCACAAGAGAACGACGCAGGGATGAGTAACCAGTTCGTGGACGAGGATTTGATCTTTGACATGCCGAATGTTCTGGTCAATATGGCTGAGGGAATGCTGCTTAGTCCTCCTCCTTTTGACATTGGTGTGGAACCGAATAGCCCAGAAAACATCGAACATGAGACAAGCCTGTGGAATTTCCCTTAA 549 0.5337 MYSGNATGSSRASSGTGRYRGVRRRSNGKWVSEIREPKKPSRIWLGTFPTPEMAAVAYDVAAYALKGKDAELNFPDSASSLPVPASLSARDIQVAAAAAAAAAGAAKDAMQTPTGNYNSSGAQENDAGMSNQFVDEDLIFDMPNVLVNMAEGMLLSPPPFDIGVEPNSPENIEHETSLWNFP* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01131 182 ProSiteProfiles AP2/ERF domain profile. 18 75 IPR001471 GO:0003700|GO:0006355
Lapu7g01131 182 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 18 180 IPR045277 GO:0003700
Lapu7g01131 182 MobiDBLite consensus disorder prediction 111 127 - -
Lapu7g01131 182 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Lapu7g01131 182 SMART rav1_2 18 81 IPR001471 GO:0003700|GO:0006355
Lapu7g01131 182 MobiDBLite consensus disorder prediction 1 31 - -
Lapu7g01131 182 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Lapu7g01131 182 PRINTS Ethylene responsive element binding protein signature 41 57 IPR001471 GO:0003700|GO:0006355
Lapu7g01131 182 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Lapu7g01131 182 Gene3D AP2/ERF domain 17 76 IPR036955 GO:0003700|GO:0006355
Lapu7g01131 182 MobiDBLite consensus disorder prediction 1 16 - -
Lapu7g01131 182 Pfam AP2 domain 18 67 IPR001471 GO:0003700|GO:0006355
Lapu7g01131 182 FunFam Ethylene-responsive transcription factor 2 18 76 - -
Lapu7g01131 182 MobiDBLite consensus disorder prediction 108 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01131 Lapu-Chr7 23006585 23007805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01131 8 182 AP2-EREBP Transcription Factor Family AT2G36450 58.919 1.71e-50 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu7g01131 AP2 9.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01131 - - pvu:PHAVU_007G222600g 323.168