Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01124 ATGACCCCACTCTTGACCCCATTATCTCCTGGGGCTCCACGGGCTTTAGCTTCGTCGTCTGGGACCCCCTGGAGTTCGCCAGAATCGTCTTGCCGCGACATTTCAAGCACAACAACTTCTCCAGTTTCGTTCGCCAGCTCAATACTTACGTGGGGATTCCGCAAGATTGACACAGACAAGTGGGAGTTTTTCAATGAAGCATTCCAGCGATCGAAGAAGCACTTGCTGAAGAATATCCAAAGACGCAGGTCACCACAATCCCAGCAGGTTGGTAGCTATATTGGAATTGGATCTTCTACTGAGGCAGGGAGATCTGAGGTTGAGGTTGAGATAGAAAAGCTTAGGAAAGAAAGAACTATGTTGATGGAAGAGGTGGTTGATTTGCAGCAAGAGCAACGAAGAACGGCTAACCGTGCAGGAGAAGTGAATCAAAGGCTCCAATCTGCAGAACACAGGCAGAAACAAATGGTTTCTTTCCTGGCCAAGTTGATCCAAAACCCAGCCTTTTTAGCCCGCCTTAGGCATAAGAAGGAACAAAGAGAAATAGATTCTCCAAGAGTGGTAAGGAAGTTCCTCAAGCAGCACCAACATGAAACTGGAACAGCAGAAACTCTCCAAGAAGGACAGATAGTGAGGTACCAACCTGATTGGAGAAATATAGGCATGTCTTCTGAAACTCCAAAACTATGTCCGGTTTCCATTGAACAGTCTCCTCACTACCTTTCACAGGGTTTGGCAGGAGAAATGAGTGGAGGTGCAGAAGATCTGAATGCTCAAATTGAGAATATTGTAACAGATGATGATTTGGCTGCAGTGCACGGGATCACACCTCCTCAAGAAATGATGATTGGAGAAGGATCATCCAGCTTTGGAGCTGAAGACCCTCTTTTCAAAGGGAAGAGTGTTATGAGCCCAAGTCTACAACTTCCTCCTGAGTATTTTACTTCCTTCCCAGAGGTTTTGTCCCAGGAGAAAGGCTTTCAAGACTTTTCTGCTCTTGGAACTGAAGATATTATCAAGCTTGAAGATATATGGGACTATGGCCTCAATCTTAGTGGTGGTGCTTGTTCAGGCTGTGGGAATGACCTGTGGGACAATCCTATGAATTATGAAGATGTTCCAGAGTTTGGAGTAACAAGTGGTATGTCTGAGTCAGACATCTGGGATATTGGCTCTGGAAGTTTGGGAATTGATAAGTGGCCAGGTGATGAACCTTCTATTGGTGAAATAGATGGTCAACCTGGTCAGCCAAAAGAAGATAGACCTCACAATGTTCATCCATAG 1284 0.4548 MTPLLTPLSPGAPRALASSSGTPWSSPESSCRDISSTTTSPVSFASSILTWGFRKIDTDKWEFFNEAFQRSKKHLLKNIQRRRSPQSQQVGSYIGIGSSTEAGRSEVEVEIEKLRKERTMLMEEVVDLQQEQRRTANRAGEVNQRLQSAEHRQKQMVSFLAKLIQNPAFLARLRHKKEQREIDSPRVVRKFLKQHQHETGTAETLQEGQIVRYQPDWRNIGMSSETPKLCPVSIEQSPHYLSQGLAGEMSGGAEDLNAQIENIVTDDDLAAVHGITPPQEMMIGEGSSSFGAEDPLFKGKSVMSPSLQLPPEYFTSFPEVLSQEKGFQDFSALGTEDIIKLEDIWDYGLNLSGGACSGCGNDLWDNPMNYEDVPEFGVTSGMSESDIWDIGSGSLGIDKWPGDEPSIGEIDGQPGQPKEDRPHNVHP* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01124 427 Coils Coil 104 131 - -
Lapu7g01124 427 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 43 205 IPR027725 -
Lapu7g01124 427 MobiDBLite consensus disorder prediction 13 39 - -
Lapu7g01124 427 MobiDBLite consensus disorder prediction 393 427 - -
Lapu7g01124 427 MobiDBLite consensus disorder prediction 1 39 - -
Lapu7g01124 427 Gene3D - 34 83 IPR036388 -
Lapu7g01124 427 Pfam HSF-type DNA-binding 41 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01124 Lapu-Chr7 22804103 22806889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01124 43 390 HSF AT5G03720 36.620 3.47e-52 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lapu7g01124 HSF_DNA-bind 2.7e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01124 K09419 - gmx:100780835 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01124 7 22804103 22806889 Lapu7g01124 7 22804103 22806889 ECH