Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01119 ATGGAAGCAGCACTCAGCAACAACACCATTTCTGCAGGGGCAACTCCACCACCATCAGTGACACCATCTGTGGTGTCTCAGCCAATGAACATGAATGTTAACATGAATATGAACGTGGGAAACACCGAAGGAACACCAGCACCAGCACCAGCACCAGCACCAACACCAATCCCAACACCAACAACGATGGTTTCTTCAGTGCCAGCTGCAGCAACAACGACAGCAGCATTGGCGACAACAACACCAGGGAGCACTGGGGGGCAAGGGAGTTTTGACTTGTTTGGGAAGAAGAAGAGAGGGAGGCCGAGAAAGTATGATGCAGATGGGAACCTGAGGGTGAGTGCAACACCAACACCACCTCCACCAGGTTTCACTTTGTCCACACCTTCTGAGTTCTCTAACAAAAGGGGCCGTGGCAAACACACGGCTTTTGGCAACTACCAACTCTTTTCTTCTTTTGGTGAGGTGTTTGCAAATACAGCTGCTGGTGATTTCATACCGCATGTGGTGACTGTTTATACTGGAGAGGATGTAGCTGGAAAAATCTTGTCATTTGCTCAGAAGGGTCCAAGAGGAATATGCATTCTCTCTGCCAATGGAGCTATCTCAAATGTCACCATACGCCAACCCGGTTCTTCTGGTGGCATATTAACTTACGAGGCATGCTTATTTATGTCTTCTGCCAATATAGAATATGGATACCATATAGGACAGCATTGGGTGCATTTATGTCAGTCCTTCATTCACTTTCAGGGTCGATTTGAGATTTTATCTTTGTCTGGATCATTCACTGTCGCTGATAACAGTGGCATGAAAAGTCGAACTGGTGGATTGAGTGTCTCACTTGCTGGCCCTGATGGTCGAGTGATAGGAGGTGGTGTTGCTGGACTTTTAACAGCTGCTGGTCCCATCCAAATTGTAGTAGGAAGCTTCACGCAAAATGCGCAGAAGAGCCAAAAGAAGAAGTATCAACGTGAACAACAGACAGTGGTCTCCCCTACTTCAGCTGTTCCAGAAACTGTGACATTTGCTAGACCTATCTCACAAGCAAATGCTGATGGTGAAAACTTTTTGATGCCGATGTCTCAGATACCAGATCAAACCCAGAGAGAATCTGTCAGTGTTTCAAGTGACAAACAGAACCTAGATGCTACACCTGACGCTGCTACTTGGAATGGTTCTGAGGAATATTCAGACCAGAGGATATCCCCAGACATCAACATATCCTTGCCTGATGAATAG 1242 0.4662 MEAALSNNTISAGATPPPSVTPSVVSQPMNMNVNMNMNVGNTEGTPAPAPAPAPTPIPTPTTMVSSVPAAATTTAALATTTPGSTGGQGSFDLFGKKKRGRPRKYDADGNLRVSATPTPPPPGFTLSTPSEFSNKRGRGKHTAFGNYQLFSSFGEVFANTAAGDFIPHVVTVYTGEDVAGKILSFAQKGPRGICILSANGAISNVTIRQPGSSGGILTYEACLFMSSANIEYGYHIGQHWVHLCQSFIHFQGRFEILSLSGSFTVADNSGMKSRTGGLSVSLAGPDGRVIGGGVAGLLTAAGPIQIVVGSFTQNAQKSQKKKYQREQQTVVSPTSAVPETVTFARPISQANADGENFLMPMSQIPDQTQRESVSVSSDKQNLDATPDAATWNGSEEYSDQRISPDINISLPDE* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01119 413 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 61 380 IPR039605 GO:0003680
Lapu7g01119 413 Pfam Plants and Prokaryotes Conserved (PCC) domain 167 312 IPR005175 -
Lapu7g01119 413 MobiDBLite consensus disorder prediction 79 127 - -
Lapu7g01119 413 Gene3D - 167 331 - -
Lapu7g01119 413 ProSiteProfiles PPC domain profile profile. 162 337 IPR005175 -
Lapu7g01119 413 MobiDBLite consensus disorder prediction 362 405 - -
Lapu7g01119 413 MobiDBLite consensus disorder prediction 1 22 - -
Lapu7g01119 413 SUPERFAMILY AF0104/ALDC/Ptd012-like 164 317 - -
Lapu7g01119 413 Coils Coil 410 413 - -
Lapu7g01119 413 MobiDBLite consensus disorder prediction 362 413 - -
Lapu7g01119 413 CDD DUF296 167 311 IPR005175 -
Lapu7g01119 413 MobiDBLite consensus disorder prediction 94 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01119 Lapu-Chr7 22521630 22526166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01119 96 381 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 44.000 1.17e-61 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01119 - - gmx:100779227 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01119 7 22521630 22526166 Lapu7g01119 7 22521630 22526166 ECH