Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01116 ATGGCTTCTTGCATGTGGCTCAAGAGTGCATGTGGTGGCAGTGGGAAGAAGCCACCGCCGCCGAGGGACGTGCCACGTGGGCACTTGGCGGTGATGGTGGGAGAAGATGCAAAGAGGAGGTTTGTGATAAGGGCTGATTACCTTAACCATCCCTTGCTTCAAAAACTGTTAGACCAATATGAAGGTTGTGGCTTCAACAAGAATGGTCCTCTTGCTATACCTTGTGATGAGTACCTTTTCCAAGATATTATCCAGGCCCTTCGAGACGGAACATCCTCTTCCCATGTGCCCCTCAAGAAGCTCCACTTCGAGGACTCTGTGCCCTTACTTCAAGACTATGATGGCAAAGGGAGTAGCAGCAACTAA 366 0.5027 MASCMWLKSACGGSGKKPPPPRDVPRGHLAVMVGEDAKRRFVIRADYLNHPLLQKLLDQYEGCGFNKNGPLAIPCDEYLFQDIIQALRDGTSSSHVPLKKLHFEDSVPLLQDYDGKGSSSN* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01116 121 Pfam Auxin responsive protein 20 87 IPR003676 GO:0009733
Lapu7g01116 121 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 15 83 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01116 Lapu-Chr7 22492242 22492607 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01116 6 94 Calmodulin-binding Proteins AT4G34750 52.222 2.50e-22 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01116 K14488 - gmx:100777611 182.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01116 7 22492242 22492607 Lapu7g01116 7 22492242 22492607 ECH